| Sequence 1: | NP_001262885.1 | Gene: | Nup98-96 / 42816 | FlyBaseID: | FBgn0039120 | Length: | 1960 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_176175.1 | Gene: | AT1G59660 / 842256 | AraportID: | AT1G59660 | Length: | 997 | Species: | Arabidopsis thaliana |
| Alignment Length: | 1190 | Identity: | 317/1190 - (26%) |
|---|---|---|---|
| Similarity: | 453/1190 - (38%) | Gaps: | 396/1190 - (33%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 2 FGGAKPSFGATPAATSFGG-----FSGTTTTTPFGQS---------AFGKPAAPAFGN------- 45
Fly 46 TSTFA--------------------AQPA-------QQSLFGAAATPA-----QPAGGL-----F 73
Fly 74 GANTSTGFGSTATAQPTAFGAFSQP---QQTSNIFGSTQT----AASTSLFGQSTLPAFGA---- 127
Fly 128 -----------------------AKPTM-----TAFGQTAAAQPT---GS--LFGQPAAATSTTG 159
Fly 160 FGGFGTSAPTTTNVFGSGTASAFAQP---QATAVGASGVNTGTAVAKYQPTIGTDTLMKSGQANS 221
Fly 222 VNTKQHCITAMKEFEGKSLEELRLEDYMCGRKGPQ--AGNAPGAFGFGAQVTQPAQPASGGLFGS 284
Fly 285 TAQPSTGLFGQTVTENKSMFGTTAFGQQPATNNAFGAATQQNNFLQKPFGATTTTPFAAPAADAS 349
Fly 350 NPFGAKPAFGQ------GGSLFGQAPATSAAPAFGQTNTGFGGFGTTAGATQQSTLFGATPAADP 408
Fly 409 NKSAFGLGTAASAATTGFGFGAPATSTAGGGLFGNKPATSFAAPTFGATSTASTPFSN--FGLNT 471
Fly 472 STAATGGGLFNSGLNKPATSGFGG-FGATSAAPLNFNAGNTGGSLFG---------NTAKPGGGL 526
Fly 527 FGGGTTTLGGTGAAPTGGLFGGGTTSFGGVGGSLGGGGFGMGTNNSLTGGIMGAQPTLG---IMT 588
Fly 589 PSHQPIHQQILARVTSPYGDSPIFKDLKLSSEADATRATNPAAQQAVLDLTSNQYKISTS---NN 650
Fly 651 PAPMKVKALGSTLNRKSLFD-----GLEEFDASVEGFNLKPSAKRLVIKPKVK--SVEGGNPSSS 708
Fly 709 IGSAPNTPQSRPKG--ATPNKERESFSGAIPSEPLPPAG-NSPGATNG--RESQDNG-------- 760
Fly 761 ---RRESWLHPNNLEKVRQHNIQTGMDQGSPHNSTLNELVPRKPLDTYRPSSTVRLSVSTIPENP 822
Fly 823 FEDQSSTIARRETFTSQQANESVLSNRSNEAEDSAANQSRLAIEAAAAEAADDESHPTGIVLRRV 887
Fly 888 GYYTIPSLDDLRS-YLAEDGSCV-VPNFTVGREGYGNVFFGKEMDVAGLNLDEIVHFRNKEIIIY 950
Fly 951 PDDENKPPIGQGLNRDAQVTLDQVWPLDKTKHEAIKDPQRLLEMDWEGKLRRVCDKNDTRFIEYR 1015
Fly 1016 PETGSWVFRVKHFSKYGLGD 1035 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Nup98-96 | NP_001262885.1 | Nucleoporin_FG | 395..481 | CDD:316182 | 22/87 (25%) |
| Nucleoporin2 | 888..1027 | CDD:309287 | 52/140 (37%) | ||
| Nup96 | 1484..1762 | CDD:314912 | |||
| Nucleoporin_FG | <1..74 | CDD:316182 | 37/129 (29%) | ||
| Nucleoporin_FG | 50..164 | CDD:316182 | 57/194 (29%) | ||
| Nucleoporin_FG | 254..318 | CDD:316182 | 19/65 (29%) | ||
| NupH_GANP | 316..>522 | CDD:318883 | 53/223 (24%) | ||
| AT1G59660 | NP_176175.1 | Nucleoporin_FG | 46..143 | CDD:290362 | 26/97 (27%) |
| Nucleoporin2 | 846..986 | CDD:282016 | 52/141 (37%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Domainoid | 1 | 1.000 | 109 | 1.000 | Domainoid score | I2119 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG0845 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 294 | 1.000 | Inparanoid score | I815 |
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D93359at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0003622 | |
| OrthoInspector | 1 | 1.000 | - | - | otm2493 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_101756 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR23198 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X1810 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 10 | 9.870 | |||||