Protein Alignment Nup98-96 and AT1G10390

DIOPT Version :10

• Sequence 1: NP_651187.2
• Gene: Nup98-96 / 42816
• FlyBaseID: FBgn0039120
• Length: 1960
• Species: Drosophila melanogaster
• Sequence 2: NP_172510.2
• Gene: AT1G10390 / 837579
• AraportID: AT1G10390
• Length: 1041
• Species: Arabidopsis thaliana
• Alignment Length: 1169
• Identity: 330/1169 - (28%)
• Similarity: 471/1169 - (40%)
• Gaps: 346/1169 - (29%)

  Fly     2 FGGAKPSFGATPAATSFGGFSG---------TTTTTPFGQS------------------------ 33
            ||.:.|:|||:||::.|||.||         |..:.|||.|
plant    87 FGNSTPAFGASPASSPFGGSSGFGQKPLGFSTPQSNPFGNSTQQSQPAFGNTSFGSSTPFGATNT 151

  Fly    34 -AFGKPAAPAFGNTSTFAAQPAQQSLFGAAATPA---------------------QPA------- 69
             |||.|:.|:||.|||.:...:....|||..|||                     .||
plant   152 PAFGAPSTPSFGATSTPSFGASSTPAFGATNTPAFGASNSPSFGATNTPAFGASPTPAFGSTGTT 216

  Fly    70 --------GGLFGANTSTGFGSTAT----AQPT-AFGAFSQPQQTSNIFGSTQT----AASTSLF 117
                    ||.|||:.:..||::.|    |..| ||||.|.|     .||::.|    |:||..|
plant   217 FGNTGFGSGGAFGASNTPAFGASGTPAFGASGTPAFGASSTP-----AFGASSTPAFGASSTPAF 276

  Fly   118 GQSTLPAFGAAKPTMTAFGQTAAAQPTGSLFGQPAAATSTTGFGGFGTSAPTTTNVFGSGTASAF 182
            |.|:.|:|||:..:..:||.:.|...:.|.||..|..::.:.|||...|.||    ||   .|.|
plant   277 GGSSTPSFGASNTSSFSFGSSPAFGQSTSAFGSSAFGSTPSPFGGAQASTPT----FG---GSGF 334

  Fly   183 AQPQATAVGASGVNTGTAVAKYQPTIGTDTLMKSGQANSVNTKQHCITAMKEFEGKSLEELRLED 247
            .  |:|..|..|   |:....|.||:..||    |.......|...|:||..::.|:.||||.||
plant   335 G--QSTFGGQQG---GSRAVPYAPTVEADT----GTGTQPAGKLESISAMPAYKEKNYEELRWED 390

  Fly   248 YMCGRKGP--QAGNAPGAFGFGAQVTQPAQPASGGLFGSTAQPSTGLFGQTVTENKSMFGTTAFG 310
            |..|.||.  .||.:||..|||...:||...:....||.|:...|..|..:.:       |..|.
plant   391 YQRGDKGGPLPAGQSPGNAGFGISPSQPNPFSPSPAFGQTSANPTNPFSSSTS-------TNPFA 448

  Fly   311 QQPAT--NNAFGAATQQNNFLQKPFG------------ATTTTPFAAPAA-DASNP---FGAK-- 355
            .|..|  :::||.||  :||...|||            :|||:.|.:.:| ..:.|   ||:.
plant   449 PQTPTIASSSFGTAT--SNFGSSPFGVTSSSNLFGSGSSTTTSVFGSSSAFGTTTPSPLFGSSST 511

  Fly   356 PAFGQGGSLFGQAPATSAAPAFGQTNTGFGGFGTTAGATQQSTLFGATPAADPNKSAFGLGTAAS 420
            |.||...|:||.||...|.||||.              :|.||||.:||:.....||||
plant   512 PGFGSSSSIFGSAPGQGATPAFGN--------------SQPSTLFNSTPSTGQTGSAFG------ 556

  Fly   421 AATTGFGFGAPATSTAGGGLFGNKPATSFAAPTFGATSTASTPFSNFGLNTSTAATGGGLFNSGL 485
              .||..||.          ||..     :||.||..|..:.|.:.||...|:::|
plant   557 --QTGSAFGQ----------FGQS-----SAPAFGQNSIFNKPSTGFGNMFSSSST--------- 595

  Fly   486 NKPATSGFGGFGATSAAPLNFNAGNTGGSLFGNTAKPGGGLFGGGTTTLGGTGAAPTGGLFGGGT 550
              ..||....||.|..|         |.:.| .:|:||....|.|....|...||.|.|..||
plant   596 --LTTSSSSPFGQTMPA---------GVTPF-QSAQPGQASNGFGFNNFGQNQAANTTGNAGG-- 646

  Fly   551 TSFGGVGGSLGGGGFGMGTNNSLTGGIMGAQPTLGIMTPSHQPIHQQIL--ARVTSPYGDSPIFK 613
                  .|..|.|.||.                      |..|::..:|  ..||:|:|..|...
plant   647 ------LGIFGQGNFGQ----------------------SPAPLNSVVLQPVAVTNPFGTLPAMP 683

  Fly   614 DLKLSSEADATRATNPAAQQAVLDLTSNQYKISTS---NNPAPMKVKALGST---LNRK------ 666
            .:.::...::               .|.||.||:.   :.|||:::.:|.::   |:|:
plant   684 QISINQGGNS---------------PSIQYGISSMPVVDKPAPVRISSLLTSRHLLHRRVRLPAR 733

  Fly   667 -----------SLFDGLEEFDASVEGFNLKPSAKRLVIKPKVKSVEGGNPSSSIGSAPNTPQSRP 720
                       ..|...||..::       |.|..|.|..:       ||.:.:........||.
plant   734 KYRPGENGPKVPFFTDDEESSST-------PKADALFIPRE-------NPRALVIRPVQQWSSRD 784

  Fly   721 KGATPNKERESFSGAIPSEPLPPAGNSPG-ATNGRESQDNGRRESWLHPNNLEKVRQHNIQTGMD 784
            |...|.::|       |:.||...|.||. ||:......||                 |.:.|..
plant   785 KSILPKEQR-------PTAPLHDNGKSPDMATDAANHDRNG-----------------NGELGAT 825

  Fly   785 QGSPHNS-TLNELVPRKPLDTYRPSSTVRLSVSTIPENPFEDQSSTIARRETFTSQQANESVLSN 848
            ....|.| ..|:          :|:.|.|...::..|.|:          :|.:..:|.|:.:
plant   826 GERIHTSVNANQ----------KPNGTTRSDQASEKERPY----------KTLSGHRAGEAAI-- 868

  Fly   849 RSNEAEDSAANQSRLAIEAAAAEAADDESHPTGIVLRRVGYYTIPSLDDLRS-YLAEDGSC-VVP 911
                ..:..|:     |||...:            ||:..|:|.|.:.:|.: ..|:.|.| .|.
plant   869 ----VYEHGAD-----IEALMPK------------LRQSDYFTEPRIQELAAKERADPGYCRRVR 912

  Fly   912 NFTVGREGYGNVFFGKEMDVAGLNLDEIVHFRNKEIIIYPDDENKPPIGQGLNRDAQVTLDQVWP 976
            :|.|||.|||::.|..|.||..|:|:.:|.|..:|:|:|.|:..||.:|||||:.|:|||..:..
plant   913 DFVVGRHGYGSIKFMGETDVRRLDLESLVQFNTREVIVYMDESKKPAVGQGLNKPAEVTLLNIKC 977

  Fly   977 LDKTKHEAIKDPQRLLEMDWEGKLRRVCDKNDTRFIEYRPETGSWVFRVKHFSKYGLGDSDEED 1040
            :||...:...:.:|:.:  ::..|::..:.....|:.:.|..|.|.|||:|||.|.|||.||||
plant   978 IDKKTGKQFTEGERVEK--YKMMLKKKAEAQGAEFVSFDPVKGEWKFRVEHFSSYKLGDEDEED 1039

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Nup98-96	NP_651187.2	Nucleoporin_FG	<1..74	CDD:463941	38/141 (27%)
		COG4625	42..>577	CDD:443664	185/601 (31%)
		Nucleoporin_FG	50..164	CDD:463941	47/158 (30%)
		Nucleoporin_FG2	400..>522	CDD:435043	32/121 (26%)
		Nucleoporin2	886..1028	CDD:461171	49/143 (34%)
		Nup96	1482..1762	CDD:463462
AT1G10390	NP_172510.2	Chi1	9..>212	CDD:442692	36/124 (29%)
		COG4625	195..>692	CDD:443664	182/614 (30%)
		PTZ00473	<236..340	CDD:240430	43/117 (37%)
		Nucleoporin2	886..1027	CDD:461171	49/142 (35%)