Sequence 1: | NP_001262885.1 | Gene: | Nup98-96 / 42816 | FlyBaseID: | FBgn0039120 | Length: | 1960 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001031018.1 | Gene: | AT1G10390 / 837579 | AraportID: | AT1G10390 | Length: | 1041 | Species: | Arabidopsis thaliana |
Alignment Length: | 1169 | Identity: | 330/1169 - (28%) |
---|---|---|---|
Similarity: | 471/1169 - (40%) | Gaps: | 346/1169 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 FGGAKPSFGATPAATSFGGFSG---------TTTTTPFGQS------------------------ 33
Fly 34 -AFGKPAAPAFGNTSTFAAQPAQQSLFGAAATPA---------------------QPA------- 69
Fly 70 --------GGLFGANTSTGFGSTAT----AQPT-AFGAFSQPQQTSNIFGSTQT----AASTSLF 117
Fly 118 GQSTLPAFGAAKPTMTAFGQTAAAQPTGSLFGQPAAATSTTGFGGFGTSAPTTTNVFGSGTASAF 182
Fly 183 AQPQATAVGASGVNTGTAVAKYQPTIGTDTLMKSGQANSVNTKQHCITAMKEFEGKSLEELRLED 247
Fly 248 YMCGRKGP--QAGNAPGAFGFGAQVTQPAQPASGGLFGSTAQPSTGLFGQTVTENKSMFGTTAFG 310
Fly 311 QQPAT--NNAFGAATQQNNFLQKPFG------------ATTTTPFAAPAA-DASNP---FGAK-- 355
Fly 356 PAFGQGGSLFGQAPATSAAPAFGQTNTGFGGFGTTAGATQQSTLFGATPAADPNKSAFGLGTAAS 420
Fly 421 AATTGFGFGAPATSTAGGGLFGNKPATSFAAPTFGATSTASTPFSNFGLNTSTAATGGGLFNSGL 485
Fly 486 NKPATSGFGGFGATSAAPLNFNAGNTGGSLFGNTAKPGGGLFGGGTTTLGGTGAAPTGGLFGGGT 550
Fly 551 TSFGGVGGSLGGGGFGMGTNNSLTGGIMGAQPTLGIMTPSHQPIHQQIL--ARVTSPYGDSPIFK 613
Fly 614 DLKLSSEADATRATNPAAQQAVLDLTSNQYKISTS---NNPAPMKVKALGST---LNRK------ 666
Fly 667 -----------SLFDGLEEFDASVEGFNLKPSAKRLVIKPKVKSVEGGNPSSSIGSAPNTPQSRP 720
Fly 721 KGATPNKERESFSGAIPSEPLPPAGNSPG-ATNGRESQDNGRRESWLHPNNLEKVRQHNIQTGMD 784
Fly 785 QGSPHNS-TLNELVPRKPLDTYRPSSTVRLSVSTIPENPFEDQSSTIARRETFTSQQANESVLSN 848
Fly 849 RSNEAEDSAANQSRLAIEAAAAEAADDESHPTGIVLRRVGYYTIPSLDDLRS-YLAEDGSC-VVP 911
Fly 912 NFTVGREGYGNVFFGKEMDVAGLNLDEIVHFRNKEIIIYPDDENKPPIGQGLNRDAQVTLDQVWP 976
Fly 977 LDKTKHEAIKDPQRLLEMDWEGKLRRVCDKNDTRFIEYRPETGSWVFRVKHFSKYGLGDSDEED 1040 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nup98-96 | NP_001262885.1 | Nucleoporin_FG | 395..481 | CDD:316182 | 27/85 (32%) |
Nucleoporin2 | 888..1027 | CDD:309287 | 49/140 (35%) | ||
Nup96 | 1484..1762 | CDD:314912 | |||
Nucleoporin_FG | <1..74 | CDD:316182 | 38/141 (27%) | ||
Nucleoporin_FG | 50..164 | CDD:316182 | 47/158 (30%) | ||
Nucleoporin_FG | 254..318 | CDD:316182 | 19/67 (28%) | ||
NupH_GANP | 316..>522 | CDD:318883 | 66/223 (30%) | ||
AT1G10390 | NP_001031018.1 | PHA03307 | 37..>394 | CDD:223039 | 105/327 (32%) |
PTZ00473 | <236..340 | CDD:240430 | 43/117 (37%) | ||
SOG2 | <399..>512 | CDD:371045 | 35/121 (29%) | ||
Med15 | 401..>804 | CDD:312941 | 137/535 (26%) | ||
Nucleoporin2 | 887..1027 | CDD:367810 | 49/141 (35%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 109 | 1.000 | Domainoid score | I2119 |
eggNOG | 1 | 0.900 | - | - | E1_KOG0845 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 294 | 1.000 | Inparanoid score | I815 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D93359at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0003622 | |
OrthoInspector | 1 | 1.000 | - | - | otm2493 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101756 | |
Panther | 1 | 1.100 | - | - | O | PTHR23198 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X1810 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
10 | 9.870 |