Sequence 1: | NP_001262885.1 | Gene: | Nup98-96 / 42816 | FlyBaseID: | FBgn0039120 | Length: | 1960 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_956979.2 | Gene: | nup98 / 777756 | ZFINID: | ZDB-GENE-040426-1180 | Length: | 1814 | Species: | Danio rerio |
Alignment Length: | 2080 | Identity: | 686/2080 - (32%) |
---|---|---|---|
Similarity: | 982/2080 - (47%) | Gaps: | 438/2080 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 SFGATPAATSFGGFSGTTTTTPFGQSAFGKPAAPAFGNTSTFAAQPAQQSLFGAAATPAQPAGGL 72
Fly 73 FGANTSTGFGSTATAQPTAFGAFSQPQQTSN-IFGSTQTAASTSLFGQSTLPAFGAAKPTMTAFG 136
Fly 137 QTAAAQPTGSLFGQPAAATSTTGFGGFGTSAPTTTNVFGSGTASAFAQPQATAVGASGVNTGTAV 201
Fly 202 AKYQPTIGTDTLMKSGQANSVNTKQHCITAMKEFEGKSLEELRLEDYMCGRKGPQAGNAPGAFG- 265
Fly 266 ---FGAQVTQPAQPASG-GLFGSTAQPSTGL-FGQTVTENKSMFGTTAFGQQPATNNAFGAAT-- 323
Fly 324 ------------QQNNFLQKPFGATTTT-----PFAAPAADASNPFGAKPAF-----GQGGSLFG 366
Fly 367 QAPATSA----APAFGQTNTGFGGFGTTAGATQQSTLFGATPAADPNKSAFGLGTAASAATTGFG 427
Fly 428 FGAPATSTAGGGLFGNKPATSFAAPTFGATSTASTPFSNFGLNTSTAATGGGLFNSGLNKPATSG 492
Fly 493 FG-----GFGATSAAPLNFNAGNTGGSLFGNTAKPGGGLFGGGTTTLGGTGAAPTGGLFGGGTTS 552
Fly 553 FGGVGGSLGGGGFGMGTNNSLTGGIMGAQPTLGIMTPS-----HQPIHQQILARVTSPYGDSPIF 612
Fly 613 KDLKLS---SEADATRATNPAAQQAVLDLTSNQYKISTSNNPAP---MKVKALGSTLNRKS-LFD 670
Fly 671 GLEEFDASVE--GFNLKPSAKRLVIKPKVKSVEGGNPSSSIGSAPNTPQSRPKGATPNKERESFS 733
Fly 734 GAIPSEPLPPAGNSPGATNGRESQDNGRRESWLHPNNLEKVRQHNIQTGMDQGSPHNSTLNELVP 798
Fly 799 RKPLDTYRPSSTVRLSVSTIPENP-------------FEDQSSTIARRETFTSQQANESVLSNRS 850
Fly 851 NE----AEDSAANQSRLAIEAAAAEAADDESHPTGIVLRRVGYYTIPSLDDLRSYLAEDGSCVVP 911
Fly 912 NFTVGREGYGNVFFGKEMDVAGLNLDEIVHFRNKEIIIYPDDENKPPIGQGLNRDAQVTLDQVWP 976
Fly 977 LDKTKHEAIKDPQRLLEMDWEGKLRRVCDKNDTRFIEYRPETGSWVFRVKHFSKYGLGDSDEEDE 1041
Fly 1042 L---PTDPKKAKIAT--------LEAQQRANAEKMT--LNSLRQAQKISEDAARNLDPKALVAGV 1093
Fly 1094 ASGFRPMDDTAEFLLMDKTQFFQAGGNSDFSMFDPPRQRPTITSPTAVLAQ--EMVGNEAHKMQL 1156
Fly 1157 MKSSFFVEDNAPEDEPMETTGRLLRHRKFFNVEPLVWKDGASESSSQYDFEHPS----------- 1210
Fly 1211 --------PALPIS--SSVSEASLMCDAHYEETSSMATGSIVAAVKETKFEMPVTKAFKFVCKPK 1265
Fly 1266 VAPIKLRATTVPLPRSIAYEM-RDNWIADLGFYKGRSFKLSFGPQNSLVLPSTYNNMQN-LKEFT 1328
Fly 1329 GPSLPVSMVFAPRSATDLSPS-----VMQLVEFNMVKGNEGFRESIIPHLEVQLNDCLSVNVEGS 1388
Fly 1389 ECPCIHPDSGTKLVSKH------FSESLKQRNAGLKEDYSVSVWSLLFALW---GDHDELVDLEK 1444
Fly 1445 NSHYMVMC-RRNLLSEWLENTLLGKDLLSKKVS---THSYLEHMLDLLSCHRVNEACELAFSYDD 1505
Fly 1506 ANLALVLSQLSSGAVFRLLMEEQLFAWQQSKSDKYIDLERLKMYMLAAGAPMMQSSHGAINLLEN 1570
Fly 1571 KNWLTALALQLWYFTAPTSSITDALNAYNDAFQAEE---CYAEPPKPSYRDA-----------PT 1621
Fly 1622 DTKKPVYDLRYHLLQLHSKRMHSLEETLNPITHTADAMDFRLSWLLLQTLRALGYRHCSPLTEAR 1686
Fly 1687 LSVDFASQLENEGLWQWGIFVLLHIKQQTQRERAVQQMLQRNVSVSAKVALYAEERFIVEELGIP 1751
Fly 1752 MSWVDYAKAVKAGASGKHHLQAKYLLKAKHFATAHDVIFQHIAPDAIINGKMKYLHSLLIQFEDT 1816
Fly 1817 EG-----SSIRVPNWANQGQIFLDFIDISAKFKQIRSVTNIADINARWENLKPQLSELCSRISLL 1876
Fly 1877 PCPTSKHRLCQSEISQSLSCLVHGMCIV------CPEMESSTVLKVA--LERLPLPQEFASKELR 1933
Fly 1934 1933 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nup98-96 | NP_001262885.1 | Nucleoporin_FG | 395..481 | CDD:316182 | 28/85 (33%) |
Nucleoporin2 | 888..1027 | CDD:309287 | 85/138 (62%) | ||
Nup96 | 1484..1762 | CDD:314912 | 115/291 (40%) | ||
Nucleoporin_FG | <1..74 | CDD:316182 | 27/65 (42%) | ||
Nucleoporin_FG | 50..164 | CDD:316182 | 44/114 (39%) | ||
Nucleoporin_FG | 254..318 | CDD:316182 | 30/69 (43%) | ||
NupH_GANP | 316..>522 | CDD:318883 | 82/238 (34%) | ||
nup98 | NP_956979.2 | Nucleoporin_FG | 39..133 | CDD:290362 | 40/103 (39%) |
Nucleoporin_FG | 217..357 | CDD:290362 | 54/156 (35%) | ||
Nucleoporin_FG | 324..>400 | CDD:290362 | 35/99 (35%) | ||
Nucleoporin2 | 741..881 | CDD:282016 | 85/139 (61%) | ||
Nup96 | 1333..1626 | CDD:288926 | 115/292 (39%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170594685 | |
Domainoid | 1 | 1.000 | 217 | 1.000 | Domainoid score | I2627 |
eggNOG | 1 | 0.900 | - | - | E1_KOG0845 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H35472 | |
Inparanoid | 1 | 1.050 | 795 | 1.000 | Inparanoid score | I488 |
OMA | 1 | 1.010 | - | - | QHG55353 | |
OrthoDB | 1 | 1.010 | - | - | D156436at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0003622 | |
OrthoInspector | 1 | 1.000 | - | - | oto41597 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101756 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR23198 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R852 |
SonicParanoid | 1 | 1.000 | - | - | X1810 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
16 | 15.800 |