| Sequence 1: | NP_001262885.1 | Gene: | Nup98-96 / 42816 | FlyBaseID: | FBgn0039120 | Length: | 1960 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_733479.1 | Gene: | Nupl1 / 71844 | MGIID: | 1919094 | Length: | 587 | Species: | Mus musculus |
| Alignment Length: | 652 | Identity: | 156/652 - (23%) |
|---|---|---|---|
| Similarity: | 224/652 - (34%) | Gaps: | 212/652 - (32%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 17 SFG-GFSGTTTTTPFGQSA-----FGKPAAP---------AFGNTSTFAAQPAQQSLFGAAATPA 66
Fly 67 QPAGGLFGANTSTGFGSTATAQPTAFG-AFSQPQQTSNIFGSTQTAASTS-LFGQSTLPAFGAAK 129
Fly 130 P--TMTAFGQTAAAQPT---------------GSLFGQPAAATSTTGFG------GFGTSAPTTT 171
Fly 172 NVFGSGTASAFAQPQATAVGASGVNTGTAVAKYQPTIGT---------------------DTLMK 215
Fly 216 --------SGQANSVNTK-----QHCITAMKEF----------EGKSLEELRLEDYMCGRKGPQA 257
Fly 258 GNAPGAFGFGAQVTQPAQPASGGLFGSTAQPSTGL-------------FGQTVTENKSMFGTTAF 309
Fly 310 GQQPATNN-------------AFGAATQ---------QNNFL--QKPFGATTTTPFAAPAADAS- 349
Fly 350 -----------NPFGAKP---AFGQGGSLF-GQAPATSAAPAFGQTNTGFG-GFGTTAGATQQST 398
Fly 399 LFGATPAADPNKSAFGLGTAASAATTGFGFGAPATSTAGGGLFG--NKPATSFAAPTFGATSTAS 461
Fly 462 TPFSNFGLNTSTAATGGGLFNSGLNKPATSGFGGFGATSAAPLNFNAGNTGGSLFGNTAKPGGGL 526
Fly 527 FG 528 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Nup98-96 | NP_001262885.1 | Nucleoporin_FG | 395..481 | CDD:316182 | 29/87 (33%) |
| Nucleoporin2 | 888..1027 | CDD:309287 | |||
| Nup96 | 1484..1762 | CDD:314912 | |||
| Nucleoporin_FG | <1..74 | CDD:316182 | 22/71 (31%) | ||
| Nucleoporin_FG | 50..164 | CDD:316182 | 39/138 (28%) | ||
| Nucleoporin_FG | 254..318 | CDD:316182 | 13/89 (15%) | ||
| NupH_GANP | 316..>522 | CDD:318883 | 64/248 (26%) | ||
| Nupl1 | NP_733479.1 | 14 X 2 AA repeats of F-G | 7..567 | 146/615 (24%) | |
| Nucleoporin_FG2 | 22..587 | CDD:292589 | 147/636 (23%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 196..236 | 8/54 (15%) | |||
| OEP | 278..424 | CDD:280481 | 25/159 (16%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 565..587 | 10/37 (27%) | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R852 |
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.940 | |||||