Protein Alignment Nup98-96 and si:ch211-216l23.2

DIOPT Version :10

• Sequence 1: NP_651187.2
• Gene: Nup98-96 / 42816
• FlyBaseID: FBgn0039120
• Length: 1960
• Species: Drosophila melanogaster
• Sequence 2: NP_001038534.1
• Gene: si:ch211-216l23.2 / 565061
• ZFINID: ZDB-GENE-030131-3806
• Length: 474
• Species: Danio rerio
• Alignment Length: 307
• Identity: 65/307 - (21%)
• Similarity: 105/307 - (34%)
• Gaps: 77/307 - (25%)

  Fly  1360 KGNEGFRESIIP--------HLEVQLNDCLSVNVEGSECPCIHPDSGTKLVS-KHFSESLKQRNA 1415
            |.|:.||....|        ||:::....|...::.|           .:|. :|.|..:....:
Zfish    22 KSNKSFRRPPYPVRQERTEEHLQLESFQSLEETIDYS-----------SIVDYEHSSHKITGLPS 75

  Fly  1416 GLKEDYSVSVWSLLFALWGDHDELVDLEKNSHYMVMCRRNLLSEWLENTLLGKDLLSKKVSTHSY 1480
            ..:|.|.||.         .|.||.:    ..|..:|.        |:.....|.:...|:...
Zfish    76 ASREQYDVST---------QHPELYE----RFYQQLCG--------ESARRPADCVVLSVNNQD- 118

  Fly  1481 LEHMLDLLSC-HRVNEACELAFSYDDANLALVLSQL-SSGAVFRLLMEEQLFAWQQSKSDKYIDL 1543
            :|:...|..| ..:....|:.:...::.|...|..: |.|:.|.:|:|:....  .|.....|..
Zfish   119 VEYPKSLGQCLQELGLTVEMLYLQSESGLTRALQDVRSDGSPFCILVEQTNVT--LSSCTVIIFS 181

  Fly  1544 ERLKMYMLAAGAPMMQSSHGAINLLENKNWLTALALQLWYFTAPTSSITDALNAYNDAFQAEEC- 1607
            |.||::.      .|...| |:..:     ||....|        ||...|||....|.:|.|.
Zfish   182 ESLKIHR------NMPKEH-AMEFV-----LTEYGRQ--------SSPQRALNPTEAATRAAELT 226

  Fly  1608 --YAEPPKPSYRDAPTDTKKPVYDLRYHLLQLHSKRMHSLEETLNPI 1652
              |.|..|......|..|:        |||.|.::.:|...|.::.:
Zfish   227 EDYLERGKLERHTVPFTTR--------HLLFLLAEGLHLYPEEVSTL 265

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Nup98-96	NP_651187.2	Nucleoporin_FG	<1..74	CDD:463941
		COG4625	42..>577	CDD:443664
		Nucleoporin_FG	50..164	CDD:463941
		Nucleoporin_FG2	400..>522	CDD:435043
		Nucleoporin2	886..1028	CDD:461171
		Nup96	1482..1762	CDD:463462	41/176 (23%)
si:ch211-216l23.2	NP_001038534.1	PHA03307	280..>471	CDD:223039