Sequence 1: | NP_001262885.1 | Gene: | Nup98-96 / 42816 | FlyBaseID: | FBgn0039120 | Length: | 1960 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001107068.1 | Gene: | nup62l / 563392 | ZFINID: | ZDB-GENE-030131-8491 | Length: | 507 | Species: | Danio rerio |
Alignment Length: | 689 | Identity: | 155/689 - (22%) |
---|---|---|---|
Similarity: | 222/689 - (32%) | Gaps: | 249/689 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 412 AFGLGTAASAATTGFGFGAPATSTAGGGLFGNKPATSFAAPTFGATSTASTPFSNFGLNTSTAAT 476
Fly 477 GGGLFNSGLNKPATSGFGG----FGATSAAPLNFNAGNTGGSLFG----NTAKPGGGLFGGGTTT 533
Fly 534 LGGTGAAP----TGGLFGGGTTSFGGVGGSLGG------------GGFGMGTNNSLTGGIMGAQP 582
Fly 583 T----LGIMTPSHQPIHQQILARVTSPYGDSPIFKDLKLSSEADATRATNPAAQQAVLDLTSNQY 643
Fly 644 KISTSNNPAPMK--VKALGSTLNRKSLFDGLEEFDASVEGFNLKPSAKRLVIKPKVKSVEGGNPS 706
Fly 707 SSIGSAPNTPQSRPKGATPNKERESFSGAIPSEPLPPAGNSPGATNGRESQDNGRRESWLHPNNL 771
Fly 772 EKVRQHNIQTGMDQGSPHNSTLNELVPRKPLDTYRPSSTVRLSVSTIPENPFEDQSSTIARRETF 836
Fly 837 TSQQANESVLSNRSNEAEDSAANQSRLAIEAAAAEAADDESHPTGIVLRRVGYYTIPSLDDLRSY 901
Fly 902 LAEDGSCVVPNFTVGREGYGNVFFGKEMDVAGLN---LDEIVHF---RNKEI--IIYPDDEN-KP 957
Fly 958 PIGQGLNRDAQVTLDQVWPLDKTKHEAIK----DPQRLLE--------MDWEGKLRRVCDKNDTR 1010
Fly 1011 FIEYRPETGSWV--------FRVKHFSKYGLGDSDEEDE 1041 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nup98-96 | NP_001262885.1 | Nucleoporin_FG | 395..481 | CDD:316182 | 20/68 (29%) |
Nucleoporin2 | 888..1027 | CDD:309287 | 27/167 (16%) | ||
Nup96 | 1484..1762 | CDD:314912 | |||
Nucleoporin_FG | <1..74 | CDD:316182 | |||
Nucleoporin_FG | 50..164 | CDD:316182 | |||
Nucleoporin_FG | 254..318 | CDD:316182 | |||
NupH_GANP | 316..>522 | CDD:318883 | 35/117 (30%) | ||
nup62l | NP_001107068.1 | Nsp1_C | 313..414 | CDD:282867 | 27/141 (19%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R852 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.030 |