| Sequence 1: | NP_001262885.1 | Gene: | Nup98-96 / 42816 | FlyBaseID: | FBgn0039120 | Length: | 1960 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001286489.1 | Gene: | Nup62 / 36830 | FlyBaseID: | FBgn0034118 | Length: | 394 | Species: | Drosophila melanogaster |
| Alignment Length: | 368 | Identity: | 107/368 - (29%) |
|---|---|---|---|
| Similarity: | 126/368 - (34%) | Gaps: | 106/368 - (28%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 367 QAPATSAAPAFGQTNTGFGGFGTTAGATQQSTLFGATPAADPNKSAFGLGTAASAATTGFGFGAP 431
Fly 432 A-TSTAGGGLFGNKPATSFAAPTFG---ATSTASTPF-------SNFGLNTSTAATGGGLFNSGL 485
Fly 486 NKPATSGFGGFGATSAAPLNFNAGNTGGSLFGNTAKPGGGLFGGG------TTTLGGT------- 537
Fly 538 ------GAAP-----TGGLFGGGTTSFGGVGGSLGGGGFGMGTNNSLTGGIMGAQPTLGIMTPSH 591
Fly 592 QPIHQQILARVTSPYGDSPIFKDLKLSSEADATRATNPAAQQAVLD--LTSNQYKISTSNNPAPM 654
Fly 655 KVKALGSTLNRKSLFDGLEEFDASVEGFNLKPSAKRLVIKPKV 697 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Nup98-96 | NP_001262885.1 | Nucleoporin_FG | 395..481 | CDD:316182 | 36/96 (38%) |
| Nucleoporin2 | 888..1027 | CDD:309287 | |||
| Nup96 | 1484..1762 | CDD:314912 | |||
| Nucleoporin_FG | <1..74 | CDD:316182 | |||
| Nucleoporin_FG | 50..164 | CDD:316182 | |||
| Nucleoporin_FG | 254..318 | CDD:316182 | |||
| NupH_GANP | 316..>522 | CDD:318883 | 59/165 (36%) | ||
| Nup62 | NP_001286489.1 | Nsp1_C | 194..300 | CDD:309972 | 30/145 (21%) |
| SMC_N | <213..392 | CDD:330553 | 28/105 (27%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R852 |
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 1.030 | |||||