Protein Alignment Nup98-96 and fon

DIOPT Version :9

• Sequence 1: NP_001262885.1
• Gene: Nup98-96 / 42816
• FlyBaseID: FBgn0039120
• Length: 1960
• Species: Drosophila melanogaster
• Sequence 2: NP_001163013.1
• Gene: fon / 35211
• FlyBaseID: FBgn0032773
• Length: 577
• Species: Drosophila melanogaster
• Alignment Length: 620
• Identity: 160/620 - (25%)
• Similarity: 210/620 - (33%)
• Gaps: 216/620 - (34%)

  Fly     3 GGAKPSFGATPAATSFGGFSGTTTTTPFGQSAFGKPAAPAFGNTSTFAAQPAQ--------QSLF 59
            ||...||||        |..|.:...  ..||.||..:......:|.:|:.|.        ::|.
  Fly    53 GGYSGSFGA--------GVDGASAQV--DDSALGKLESSYDSVGATESAEGASAGGLGGAVETLG 107

  Fly    60 GAAATPAQPA--GGLFGANTSTGFGSTATAQPTAFGAFSQPQQTSNIFGSTQTAASTSLFGQSTL 122
            |:|.|....|  |..||:|.::|||....|   :|||     |.:..||: |.|||   ||....
  Fly   108 GSAGTNTIGAGVGSSFGSNFASGFGGQNAA---SFGA-----QNAAGFGA-QNAAS---FGAQNA 160

  Fly   123 PAFG------AAKPTMTA--FGQTAAAQPTGSL-FGQPAAATSTTGFGGFGTSAPTTTNVFGSGT 178
            .:||      ||..|.:|  ||.|||.|...:: |...|.|.:...|||        .|...|
  Fly   161 ASFGSSFSSNAAFQTSSASNFGSTAAHQVGSNVEFADNANAGNKVDFGG--------VNAVDS-- 215

  Fly   179 ASAFAQPQATAVGASGVNTGTAV--AKYQPTIGTDTLMKSGQANSVNTKQHCITAMKEFEGKSLE 241
                     :|...|||.|..:|  ::|.           .....|:|.|..:..:   .|.|..
  Fly   216 ---------SAQLLSGVQTVQSVPTSEYY-----------RHEKIVSTPQQVVYTI---PGGSQR 257

  Fly   242 ELRLEDYMCGRKGPQAGNAPGAFGFGAQVTQ--PAQPASGGLFGSTAQPSTGLFGQTVTENKSMF 304
            .:..|:.:..:.              .||||  |.|.|.......|...|.....|.|..::..:
  Fly   258 YVHHEERIVEQP--------------TQVTQTVPVQTAHYYQRKVTTTASAPQLVQPVASSRLTY 308

  Fly   305 GTTA---FGQQPATNNAFGAATQQNNFLQKPFGATTTTPFAAPAADASNPFGAKPAF-GQGGSLF 365
            |:.|   ||...|:|                ||:...|.|   .::|:..||:..|| .|.||.:
  Fly   309 GSNAASTFGSNAASN----------------FGSNAATNF---GSNAATNFGSNAAFNSQFGSSY 354

  Fly   366 GQAPATSAAPAFGQTNTGFGGFGTTAGATQQSTLFGATPAADPNKSAFGLGTAASAATTGFGFGA 430
            ||        .|.|.             :|.|.|...|..|...::|.   .||||.....|.|.
  Fly   355 GQ--------NFQQN-------------SQLSQLLSQTQQAARQQAAL---QAASANQVQAGSGY 395

  Fly   431 PATSTAGGGLFGNKPATSFAAPTFGATSTASTPFSNFGLNTSTAATGGGLFNSGLNKPATSGFGG 495
            .|.|..|                                           ||||.|....|| ..
  Fly   396 AAGSQGG-------------------------------------------FNSGYNSAFNSG-SQ 416

  Fly   496 FGATSAAPLN----FNAGNTG-------GSLFGNTAKPGGGLFGG---------------GTTTL 534
            ||..||:.||    .|:.:||       |||.|.:.   |.|..|               |...|
  Fly   417 FGFNSASSLNSASSLNSASTGNSAALLSGSLLGGSQ---GSLLSGQVGGQQSLLSGSLLSGQQNL 478

  Fly   535 G-GTGAAPTGGLFGGGTTSFGGVGGSLGGGGFGMG 568
            | |..||.||.:.|..:.   |.|.|.|.|..|.|
  Fly   479 GLGLNAAQTGQVVGASSV---GAGLSAGAGNLGSG 510

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Nup98-96	NP_001262885.1	Nucleoporin_FG	395..481	CDD:316182	15/85 (18%)
		Nucleoporin2	888..1027	CDD:309287
		Nup96	1484..1762	CDD:314912
		Nucleoporin_FG	<1..74	CDD:316182	21/80 (26%)
		Nucleoporin_FG	50..164	CDD:316182	45/132 (34%)
		Nucleoporin_FG	254..318	CDD:316182	17/68 (25%)
		NupH_GANP	316..>522	CDD:318883	52/217 (24%)
fon	NP_001163013.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0845
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.900