Sequence 1: | NP_001262885.1 | Gene: | Nup98-96 / 42816 | FlyBaseID: | FBgn0039120 | Length: | 1960 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_594158.1 | Gene: | nsp1 / 2542668 | PomBaseID: | SPAC26A3.15c | Length: | 598 | Species: | Schizosaccharomyces pombe |
Alignment Length: | 499 | Identity: | 145/499 - (29%) |
---|---|---|---|
Similarity: | 182/499 - (36%) | Gaps: | 137/499 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 13 PAATSFGGFSGTTTTTPFGQSAFGKPAAPAFGNTSTFAAQPAQQSLFGAA---ATPAQPAGGLFG 74
Fly 75 ANTSTGFGSTATAQPTAFGAFSQPQQTSNIFGSTQTAASTS---LFGQSTLPAFGAAKPTMTAFG 136
Fly 137 QTAAAQPTGSLFGQPA-----AAT-----STTGFG------GFGTSAPT--TTNVFGSGTASAFA 183
Fly 184 QPQAT-----AVGASGVNTGTAVAKYQPTIGTDTLMKSGQANSVNTKQHCITAMKEFE-GKSLEE 242
Fly 243 LRLEDYMCGRKGPQAGNAPGAFGFGAQVTQPAQPASGGLFGSTAQPSTGLFGQTVTENKSMFGTT 307
Fly 308 AFGQQPATNNAFGAATQQNNFLQKPFGATTTT------PFAAPAA--DASNPFGAKPAFGQGGSL 364
Fly 365 FGQAPATSAA---PAFGQTNTGFGGFGTTAGATQ--QSTLFGATPAADPNKSAFGLGTAASAATT 424
Fly 425 GFGFGAPATSTA-----GGGLFGNKPATSFAAPTFGATSTASTP 463 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nup98-96 | NP_001262885.1 | Nucleoporin_FG | 395..481 | CDD:316182 | 29/76 (38%) |
Nucleoporin2 | 888..1027 | CDD:309287 | |||
Nup96 | 1484..1762 | CDD:314912 | |||
Nucleoporin_FG | <1..74 | CDD:316182 | 21/63 (33%) | ||
Nucleoporin_FG | 50..164 | CDD:316182 | 43/135 (32%) | ||
Nucleoporin_FG | 254..318 | CDD:316182 | 13/63 (21%) | ||
NupH_GANP | 316..>522 | CDD:318883 | 53/166 (32%) | ||
nsp1 | NP_594158.1 | Nsp1_C | 407..520 | CDD:282867 | 4/8 (50%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R852 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.030 |