| Sequence 1: | NP_001262885.1 | Gene: | Nup98-96 / 42816 | FlyBaseID: | FBgn0039120 | Length: | 1960 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001180286.1 | Gene: | NUP62 / 23636 | HGNCID: | 8066 | Length: | 522 | Species: | Homo sapiens |
| Alignment Length: | 557 | Identity: | 146/557 - (26%) |
|---|---|---|---|
| Similarity: | 203/557 - (36%) | Gaps: | 152/557 - (27%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 377 FGQTNTGFGGFGTTAGATQQSTLFGATPAADPNKSAFGLGTAASAATTGFGFGA---PATSTAGG 438
Fly 439 GLFGNKPATSFAAPTFGATSTASTPFSNFGLNTSTAATGGGLFNSGLNKPATSGFG-GFGATSAA 502
Fly 503 PLNFNAGNTGGSLFGNTAKPGGGLFGGGTTTL---------GGTGAAPTGGLFGGGTTSFGGVGG 558
Fly 559 SLGGGGFGMGTNNSLTGGIMGAQPT---LGIMTPSHQPIHQQILARVTSPYGDSPIFKDLKLSSE 620
Fly 621 ADATRATNPAAQQAVLDLTSNQYKISTSNNPAPMKVKALGSTLNRKSLFDGLEEFDASVEGFNLK 685
Fly 686 PSAKRLVIKPKVKSVEGGNPSSSIGSAPNTPQSRPKGATPNKERESFSGAIPSEPLPPAG----- 745
Fly 746 -------NSPGATNG---RESQDNGRRESWLHPNNLEKVRQ--HNIQ----------TGMDQGSP 788
Fly 789 HNSTLNELVPRKPLDTYRPSSTVRLSVSTIPE-----NPFE----DQSSTI-------ARRETFT 837
Fly 838 SQQANESVLSNRSNEAEDSAANQSRLAIEAAAAEAAD 874 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Nup98-96 | NP_001262885.1 | Nucleoporin_FG | 395..481 | CDD:316182 | 30/88 (34%) |
| Nucleoporin2 | 888..1027 | CDD:309287 | |||
| Nup96 | 1484..1762 | CDD:314912 | |||
| Nucleoporin_FG | <1..74 | CDD:316182 | |||
| Nucleoporin_FG | 50..164 | CDD:316182 | |||
| Nucleoporin_FG | 254..318 | CDD:316182 | |||
| NupH_GANP | 316..>522 | CDD:318883 | 47/148 (32%) | ||
| NUP62 | NP_001180286.1 | Nucleoporin_FG2 | 1..>255 | CDD:406391 | 96/319 (30%) |
| 5 X 2 AA repeats of F-G | 6..143 | 58/182 (32%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 169..215 | 13/58 (22%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 260..288 | 5/45 (11%) | |||
| Required for centrosome localization. /evidence=ECO:0000269|PubMed:24107630 | 328..458 | 27/133 (20%) | |||
| Nsp1_C | 328..429 | CDD:398645 | 23/101 (23%) | ||
| GAS | 367..512 | CDD:404693 | 23/107 (21%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R852 |
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| User_Submission | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 1.030 | |||||