Sequence 1: | NP_001262885.1 | Gene: | Nup98-96 / 42816 | FlyBaseID: | FBgn0039120 | Length: | 1960 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_444304.1 | Gene: | Nup62 / 18226 | MGIID: | 1351500 | Length: | 526 | Species: | Mus musculus |
Alignment Length: | 542 | Identity: | 140/542 - (25%) |
---|---|---|---|
Similarity: | 192/542 - (35%) | Gaps: | 153/542 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 377 FGQTNTGFGGFGTTAGATQQSTLFGATPAADPNKSAFGLGTAASAATTGFGFGAPATSTAGGGLF 441
Fly 442 GNKPATS-FAAPTFGATSTASTPFSNFGLNTSTAATGGGLFNSGLNKPATSGFGGFGATSAAPLN 505
Fly 506 FNAGNTGGSLFGNTAKPGGGLFGGGTTTL------GGT---GAAPTGGLFGGGTTS--------F 553
Fly 554 GGVGGSL---GGGGFGMGTNNSLTGGIMGAQPTLGIMTPSHQPIHQQILARVTSPYGDSPIFKDL 615
Fly 616 KLSSEADATRATNPAAQQAV-LDLTSNQYKISTSNNPAPMKVKALGSTLNRKSLFDGLEEFDASV 679
Fly 680 EGFNLKPSAKRLVIKPKVKSVEGGNPSSSIGSAPNTPQSRPKGATPNKERESFSG-AIPSEPLPP 743
Fly 744 AGNSPGATNGRESQDN------------GRRESWLHPNNLEKVRQ--HNIQ----------TGMD 784
Fly 785 QGSPHNSTLNELVPRKPLDTYRPSSTVRLSVSTIPE-----NPFE----DQSSTI-------ARR 833
Fly 834 ETFTSQQANESVLSNRSNEAED 855 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nup98-96 | NP_001262885.1 | Nucleoporin_FG | 395..481 | CDD:316182 | 31/86 (36%) |
Nucleoporin2 | 888..1027 | CDD:309287 | |||
Nup96 | 1484..1762 | CDD:314912 | |||
Nucleoporin_FG | <1..74 | CDD:316182 | |||
Nucleoporin_FG | 50..164 | CDD:316182 | |||
Nucleoporin_FG | 254..318 | CDD:316182 | |||
NupH_GANP | 316..>522 | CDD:318883 | 47/145 (32%) | ||
Nup62 | NP_444304.1 | 5 X 2 AA repeats of F-G. /evidence=ECO:0000250|UniProtKB:P37198 | 6..144 | 59/179 (33%) | |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 43..82 | 18/49 (37%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 128..148 | 9/19 (47%) | |||
Nsp1_C | 318..433 | CDD:282867 | 23/115 (20%) | ||
Required for centrosome localization. /evidence=ECO:0000250|UniProtKB:P37198 | 332..462 | 27/127 (21%) | |||
DUF4795 | 366..>505 | CDD:292662 | 20/93 (22%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R852 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.030 |