Sequence 1: | NP_001262885.1 | Gene: | Nup98-96 / 42816 | FlyBaseID: | FBgn0039120 | Length: | 1960 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_491232.1 | Gene: | npp-11 / 171954 | WormBaseID: | WBGene00003797 | Length: | 805 | Species: | Caenorhabditis elegans |
Alignment Length: | 777 | Identity: | 262/777 - (33%) |
---|---|---|---|
Similarity: | 325/777 - (41%) | Gaps: | 234/777 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MFGGA--KPS-FGATPAAT------SFGGFS-------GTTTTTPFGQSAFGKPAAPAFGNTSTF 49
Fly 50 AAQPAQQSLFG--AAATPAQPAGGLFG---------ANTSTGFGSTATAQPTA---FGAFSQPQQ 100
Fly 101 TSNIFGSTQTAAST-SLFGQSTLPAFGAAKPTMTAFGQTAAAQPTGSLFGQPAAATSTTGFGGFG 164
Fly 165 TSAPTTT-NVFGSGTASAFAQPQATAVGASGVNTGTAVAKYQPTIGTDTLMKSGQANSVNTKQHC 228
Fly 229 ITAMKEFEGKSLEELRLEDYMCGRKGPQAGNAPGAFGFGAQVTQPAQPA-SGGLFGST---AQPS 289
Fly 290 TGLFGQTVTENKSMFGTTAFGQQPATNNAFGAATQQNNFLQKPFGATTTTPFAAPAADASNPFGA 354
Fly 355 K--PAFGQGGSLFGQAPATSAAPAFGQTNTGFGGFGTTAGATQQSTLFGATPAADPNKSAFGLGT 417
Fly 418 AASAA----TTGFGFG----APATSTAGGGLFGNK-PATSFAAPT---FGATSTASTPFSNFGLN 470
Fly 471 TSTAATGGGLFNSGLNKPATSGFGGFGATSAAPLNFNAGNTGGSLFG--------NTAKPGGGLF 527
Fly 528 GGGTTTLGGTGAAPTGGLFGGGTTSFGGVGGSLGGGGFGMGTNNS-LTGGIMGAQPTLGIMTPSH 591
Fly 592 QPIHQQILARVTSPYGDSPIFKDLKLSSEADATRATNPAAQQAV------LDLTSNQYKISTSNN 650
Fly 651 PAPMKVKALGSTLNRKSLFDGLEEFDASVEGFNLKPSAKRLVIKPKVKSVEGGNPSSSIGSA 712 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nup98-96 | NP_001262885.1 | Nucleoporin_FG | 395..481 | CDD:316182 | 40/97 (41%) |
Nucleoporin2 | 888..1027 | CDD:309287 | |||
Nup96 | 1484..1762 | CDD:314912 | |||
Nucleoporin_FG | <1..74 | CDD:316182 | 37/90 (41%) | ||
Nucleoporin_FG | 50..164 | CDD:316182 | 47/128 (37%) | ||
Nucleoporin_FG | 254..318 | CDD:316182 | 25/67 (37%) | ||
NupH_GANP | 316..>522 | CDD:318883 | 86/227 (38%) | ||
npp-11 | NP_491232.1 | Nucleoporin_FG | 117..218 | CDD:290362 | 46/125 (37%) |
Nucleoporin_FG | 220..328 | CDD:290362 | 50/176 (28%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0845 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R852 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.840 |