Sequence 1: | NP_001262885.1 | Gene: | Nup98-96 / 42816 | FlyBaseID: | FBgn0039120 | Length: | 1960 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001265682.1 | Gene: | nup98 / 100145055 | XenbaseID: | XB-GENE-6450416 | Length: | 1790 | Species: | Xenopus tropicalis |
Alignment Length: | 2085 | Identity: | 665/2085 - (31%) |
---|---|---|---|
Similarity: | 960/2085 - (46%) | Gaps: | 453/2085 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 FGGAKPSFGATPAATSFG---GFSGTTTTTPFGQSAFGKPAAPAFGNTSTFAAQPAQQSLFGAAA 63
Fly 64 TPAQPAGGLFGANTSTGFGSTATAQPTA-FGAFSQPQQTSNIFGSTQTAASTSLFG-QSTLPAFG 126
Fly 127 AAKPTMTAFGQTAAAQPTGSLFGQPAAATSTTG-FGGFGTSAPTTTNVFGSGTASAFAQPQATAV 190
Fly 191 GASGVNTGTAVAKYQPTIGTDTLMKSGQANSVNTKQHCITAMKEFEGKSLEELRLEDYMCGRKGP 255
Fly 256 QAGNAPGAFGFGAQVTQPAQPASGGLFG---STAQPSTGLFGQTVTE-------NKSMFGTT--- 307
Fly 308 AFGQQPATNNAFGAATQQ--NNFLQKPFGATTTT-----------PFAAPAADASNPFGA-KPAF 358
Fly 359 GQGGSLFGQAPATSAAPAFGQTNTGFG-----GFGTTAGATQQSTLFGATPAADPNKSAFGLGTA 418
Fly 419 ASAATTGFGFGAPATSTAGGGLFGNKPATSFAAPTFGATSTASTPFSNFGLNTSTAATGGGLFNS 483
Fly 484 GLNKPATSGFGGFGATSAAPLNFNAGNTGGSL---FGNTAKPG-GGLFGGGTTTLGGTGAAPTGG 544
Fly 545 LFGGGTTSFGGVGGSLGGGGFGMGTNNSLTGGIMGAQPTLGIMTPSHQPIHQQIL-----ARVTS 604
Fly 605 PYGDSPIFK----DLKLSSEADATRATNPAAQQAVLDLTSNQYKISTSNNPAPMKVKALGSTLNR 665
Fly 666 KS-LFDGLEEFDASVEG--FNLKPSAKRLVIKPKVKSVEGGNPSSSIGSAPNTPQSRPKGATPNK 727
Fly 728 ERESFSGAIPSEPLPPAGNSPGATNGRESQDNGRRESWLHPNNLEKVRQHNIQTGMDQGSPHNST 792
Fly 793 LNELVPRKPLDTYRPSSTVRLSVSTIPENPFEDQSSTIARRETFTSQQANESVLSNRSNEAEDSA 857
Fly 858 ANQSRLAIEAAAAEAADDESHPTGIVLRRVGYYTIPSLDDLRSYLAEDGSCVVPNFTVGREGYGN 922
Fly 923 VFFGKEMDVAGLNLDEIVHFRNKEIIIYPDDENKPPIGQGLNRDAQVTLDQVWPLDKTKHEAIKD 987
Fly 988 PQRLLEMDWEGKLRRVCDKNDTRFIEYRPETGSWVFRVKHFSKYGLGDSDEEDEL--PTDPKKAK 1050
Fly 1051 IATLEAQ------QRANAE-KMT-------LNSLRQAQKISEDAARNLDPKALVAGVASGFRPMD 1101
Fly 1102 DTAEFLLMDKTQFFQAGGNSDFSMFDPPRQRPTITSPTAVLAQEMVGNEAHKMQLMKSSFFVEDN 1166
Fly 1167 APEDEPMETTGRLLRHRKFF--NVEP--------LVWKDGASESSS----QYDFEHPSPALPISS 1217
Fly 1218 SVSEASLMCDAHYEETSSMATGSIVAAVKETKFEMPVTKAFKFVCKPKVAP--------IKLRAT 1274
Fly 1275 TVPLPRSIAYEMRDNWIADLGFYKGRSFKLSFGPQNSLVLPSTYNNMQNLKEFTG-------PSL 1332
Fly 1333 PVSMVFAPRSATDL--SPSVMQLVEFNMVKGNEGFRESIIPHLEVQLNDCLSVNVEGSECPCIHP 1395
Fly 1396 DSGTKLVS------KHFSESLKQRNAGLKEDYSVSVWSLLFALWGDHDEL---VDLEKNSHYMVM 1451
Fly 1452 CRRNLLSEWLENTLLGKDLLSKKVSTHS---YLEHMLDLLSCHRVNEACELAFSYDDANLALVLS 1513
Fly 1514 QLSSGAVFRLLMEEQLFAWQQSKSDKYIDLERLKMYMLAAGAPMMQSS-HGAINLLENKNWLTAL 1577
Fly 1578 ALQLWYFTAPTSSITDALNAYNDAFQAEE------CYAEPPKP-----SYRDAPTDTKKPVY-DL 1630
Fly 1631 RYHLLQLHSKRMHSLEETLNPITHTADAMDFRLSWLLLQTLRALGYRHCSPLTEARLSVDFASQL 1695
Fly 1696 ENEGLWQWGIFVLLHIKQQTQRERAVQQMLQRNVSVSAKVALYAEERFIVEELGIPMSWVDYAKA 1760
Fly 1761 VKAGASGKHHLQAKYLLKAKHFATAHDVIFQHIAPDAIINGKMKYLHSLLIQFEDTEGSSIRVPN 1825
Fly 1826 WANQGQIFLDFIDISAKFKQIRSVTNIAD--INARWENLKPQLSELCSRISLLPCPTSKHRLCQS 1888
Fly 1889 EISQSLSCLVHGMCIVC-----PE--MESSTVLKVALE-------RLPLPQEFASKELR----IW 1935
Fly 1936 LEELL 1940 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nup98-96 | NP_001262885.1 | Nucleoporin_FG | 395..481 | CDD:316182 | 32/85 (38%) |
Nucleoporin2 | 888..1027 | CDD:309287 | 73/138 (53%) | ||
Nup96 | 1484..1762 | CDD:314912 | 107/290 (37%) | ||
Nucleoporin_FG | <1..74 | CDD:316182 | 30/74 (41%) | ||
Nucleoporin_FG | 50..164 | CDD:316182 | 46/116 (40%) | ||
Nucleoporin_FG | 254..318 | CDD:316182 | 27/76 (36%) | ||
NupH_GANP | 316..>522 | CDD:318883 | 74/227 (33%) | ||
nup98 | NP_001265682.1 | Nucleoporin_FG | 27..149 | CDD:290362 | 61/158 (39%) |
Nucleoporin_FG | <216..323 | CDD:290362 | 36/122 (30%) | ||
Nucleoporin_FG | 272..394 | CDD:290362 | 48/145 (33%) | ||
Nucleoporin_FG | 355..468 | CDD:290362 | 57/176 (32%) | ||
Nucleoporin2 | 727..866 | CDD:282016 | 73/138 (53%) | ||
Nup96 | 1307..1600 | CDD:288926 | 108/292 (37%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 191 | 1.000 | Domainoid score | I3196 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 1 | 1.000 | - | - | H35472 | |
Inparanoid | 1 | 1.050 | 720 | 1.000 | Inparanoid score | I623 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D156436at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0003622 | |
OrthoInspector | 1 | 1.000 | - | - | oto103242 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR23198 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X1810 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
9 | 9.160 |