DRSC/TRiP Functional Genomics Resources

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Protein Alignment tst and MTR4

DIOPT Version :10

Sequence 1:NP_524465.1 Gene:tst / 42813 FlyBaseID:FBgn0039117 Length:1197 Species:Drosophila melanogaster
Sequence 2:NP_176185.1 Gene:MTR4 / 842269 AraportID:AT1G59760 Length:988 Species:Arabidopsis thaliana


Alignment Length:1054 Identity:374/1054 - (35%)
Similarity:571/1054 - (54%) Gaps:124/1054 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 KSPKQSNVQLPSEEFRDVDD--HIMKADLKPVLNISTTTKNFKSDWAEMVDISQPINNFKEQIPC 254
            ||.::|:...|.::.:..||  .|:..:|...::..:..:|:       |.::..::|     ..
plant     7 KSVEESSDSAPPQKVQREDDSTQIINEELVGCVHDVSFPENY-------VPLAPSVHN-----KP 59

  Fly   255 PAMDFPFELDVFQKQAILKLEQRQYVFVAAHTSAGKTVVAEYAIALSKRDLTRTIYTSPIKALSN 319
            ||.||||.||.||.:||..|:..:.|.|:|||||||||||.||||:|.::..|.|||||||||||
plant    60 PAKDFPFTLDSFQSEAIKCLDNGESVMVSAHTSAGKTVVASYAIAMSLKENQRVIYTSPIKALSN 124

  Fly   320 QKYRDFRKTFKDVGLITGDLQIEPTASCLIMTTEILRSMLYCGSDVTRDLEWVIFDEVHYINNPE 384
            ||||||::.|.||||:|||:.|:|.||||:|||||||||.|.||::.|::.|:|||||||:.:.|
plant   125 QKYRDFKEEFSDVGLMTGDVTIDPNASCLVMTTEILRSMQYKGSEIMREVAWIIFDEVHYMRDSE 189

  Fly   385 RGHVWEEVIILLPEHVNIIMLSATVPNTLELADWVGSTKKRKVYVISTLKRPVPLTHFLYTGAGG 449
            ||.||||.|::.|::...:.|||||||..|.||||....::..:::.|..||.||.|:::. |||
plant   190 RGVVWEESIVMAPKNSRFVFLSATVPNAKEFADWVAKVHQQPCHIVYTDYRPTPLQHYVFP-AGG 253

  Fly   450 KSRDDIFLLVDAQGKYLQGNYEKAVER--------KKEMQGKAKGGGGGPRNHLNAKQEQYTWIG 506
               :.::|:||.:.|:.:.:::|::..        ||...||.:.|     ..:....|:.....
plant   254 ---NGLYLVVDEKSKFHEDSFQKSLNALVPTNESDKKRDNGKFQKG-----LVIGKLGEESDIFK 310

  Fly   507 LIDFLRRSNMMPVVAFTLSRNRCDSNLAALQSVDLNTEKEKGAVQKFFLQCLAKLKPPDRTIPQV 571
            |:..:.:....||:.|:.|:..|::....:..:.||::.||.||:..|...:..|...|:.:|||
plant   311 LVKMIIQRQYDPVILFSFSKKECEALAMQMSKMVLNSDDEKDAVETIFASAIDMLSDDDKKLPQV 375

  Fly   572 LVLKDALERGIGVHHSGILPILKEIVEMLFQNGLVKLLFATETFAMGVNMPARTVVFDSCKKFDG 636
            ..:...|:|||||||||:||||||::|:|||.||:|.|||||||::|:||||:||||.:.:||||
plant   376 SNILPILKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDG 440

  Fly   637 LEMRNLKPGEYIQMAGRAGRRGHDETGTAIIMCKGSVPPSMELRPMILGLPEKLQSQFILRYAVI 701
            .:.|.|..||||||:|||||||.|:.|..|:|....:.|:: .:.|:.|..:.|.|.|.|.|.::
plant   441 DKFRWLSSGEYIQMSGRAGRRGIDKRGICILMVDEKMEPAV-AKSMLKGSADSLNSAFHLSYNML 504

  Fly   702 LTCLRIESIKVEDIMKFSFKEFNLKLQLPTQQKQLRLAEDKFAMLPTLGEHLQPLVNFYDKAVEY 766
            |..||.|....|::::.||.:|.....:|..:||::..|::...|  :.|..:.|.|:|:..::|
plant   505 LNQLRCEEGDPENLLRNSFFQFQADRAIPDLEKQIKSLEEERDSL--VIEEEESLKNYYNLILQY 567

  Fly   767 WKEKHRIMKFVVTQPKIQKELKAGRVIVI------------------TQG--KHYNKLAILL-NT 810
            ...|..|.:.|.|.......|...|.:.:                  |.|  ..:||:..|. :.
plant   568 KSLKKDIREIVFTPKYCLPFLLPNRAVCLDCTNDDEEPQSFSIEDQDTWGVIMKFNKVKSLSEDD 632

  Fly   811 KSVPGKDTIYKVLVLDHQFKAKDSNSLQQGELYYKILSLTPRNMTFQPVGIGGHTVLDIKAIDII 875
            .|...:|..|.|.||.....:||.    .|:...|.:.:..|.   :||      |:.:....|.
plant   633 DSRRPEDANYTVDVLTRCMVSKDG----VGKKKVKAVPIKERG---EPV------VVTVPLSQIK 684

  Fly   876 SITKSTLKVDADAIIRNWEQRQLERFKDSPPSGSVVKAVTELNQLNESYIDNPDNIKYVNLSKEI 940
            |::.:.:.:..|.:  ..|.|:           :.:|.|:||  |:.    :||.|.   |..|:
plant   685 SLSSAIMNIPKDLV--PLEARE-----------NALKKVSEL--LSR----HPDGIP---LDPEV 727

  Fly   941 IVNADSE-----VAMLNYVDHLLRKVGEFLPHTNIAGFEQEFAKVYERRMLEIHIEELR-FKNSA 999
            .:...|.     |..|..:::|..|      | .||.......|:...:|.|..|.::: .|.:.
plant   728 DMKIKSSSYKKTVRRLEALENLFEK------H-KIAKSPLITEKLKVLQMKEELIAKIKSLKKTV 785

  Fly  1000 RNLTLYPDYCNKLK----VLRALKYIDELDEVTLKGKVACEMGQ-NELLITELILCNMFNDLEPA 1059
            |:.|... :.::||    |||.|.||...:.|.||||||||:.. .||.:|||:...:|.|.:..
plant   786 RSSTALA-FKDELKARKRVLRRLGYITSDNVVELKGKVACEISSAEELTLTELMFSGIFKDAKVE 849

  Fly  1060 EIAALLSGLVFQAKMQD--KPVIPEALKECVAAFEQINDTI--LAEEQRFQAAIETD-----NRL 1115
            |:.:|||..|::.::.|  ||     .:|....|.|:.||.  :||.| ....:|.|     ...
plant   850 ELVSLLSCFVWRERLPDAAKP-----REELDLLFIQLQDTARRVAEVQ-LDCKVEIDVESFVQSF 908

  Fly  1116 NFGLLEVVYEWARNKPFAEIMKLTTVQEGIIVRCIQQLNETLRDVKTAAIRIGNPGLQSKMEEAS 1180
            ...::|.||.||:...|.|:|::..|.||.::|.|:::.|.|:.:..||..||...|::|:|||.
plant   909 RPDIMEAVYAWAKGSKFYEVMEIARVFEGSLIRAIRRMEEVLQQLIVAAKSIGETQLEAKLEEAV 973

  Fly  1181 AAIKRDIVFTASLY 1194
            :.|||||||.||||
plant   974 SKIKRDIVFAASLY 987

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tstNP_524465.1 Ski2_N 33..143 CDD:465562
Dob10 258..>755 CDD:443638 225/504 (45%)
rRNA_proc-arch 713..999 CDD:463813 67/312 (21%)
DSHCT 1025..1188 CDD:462374 62/172 (36%)
MTR4NP_176185.1 Dob10 61..981 CDD:443638 355/980 (36%)
Blue background indicates that the domain is not in the aligned region.

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