DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tst and HEN2

DIOPT Version :9

Sequence 1:NP_001262884.1 Gene:tst / 42813 FlyBaseID:FBgn0039117 Length:1197 Species:Drosophila melanogaster
Sequence 2:NP_565338.1 Gene:HEN2 / 815269 AraportID:AT2G06990 Length:995 Species:Arabidopsis thaliana


Alignment Length:1071 Identity:357/1071 - (33%)
Similarity:564/1071 - (52%) Gaps:141/1071 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 EETSSTGTPKSPKQSNVQLPSEEFRDVDDHIMKADLK-------PVLNISTTTKNFKSDWAEMV- 239
            ||..:.|..|..:.|  :|.|:|....:....:..||       .|.|..|.||.      |.: 
plant     6 EEPETLGKRKESESS--KLRSDETPTPEPRTKRRSLKRACVHEVAVPNDYTPTKE------ETIH 62

  Fly   240 -DISQPINNFKEQIPCPAMDFPFELDVFQKQAILKLEQRQYVFVAAHTSAGKTVVAEYAIALSKR 303
             .:..|:.|..     .|..:||:||.||..::..||:::.:.|:||||||||.|||||||::.|
plant    63 GTLDNPVFNGD-----MAKTYPFKLDPFQSVSVACLERKESILVSAHTSAGKTAVAEYAIAMAFR 122

  Fly   304 DLTRTIYTSPIKALSNQKYRDFRKTFKDVGLITGDLQIEPTASCLIMTTEILRSMLYCGSDVTRD 368
            |..|.|||||:|||||||||:.:..||||||:|||:.:.|.||||:|||||||:|||.||:|.::
plant   123 DKQRVIYTSPLKALSNQKYRELQHEFKDVGLMTGDVTLSPNASCLVMTTEILRAMLYRGSEVLKE 187

  Fly   369 LEWVIFDEVHYINNPERGHVWEEVIILLPEHVNIIMLSATVPNTLELADWVGSTKKRKVYVISTL 433
            :.||||||:||:.:.|||.||||.||.||..:.::.||||:.|..|.|:|:....|:..:|:.|.
plant   188 VAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATEFAEWICYLHKQPCHVVYTD 252

  Fly   434 KRPVPLTHFLYTGAGGKSRDDIFLLVDAQGKYLQGNY---------EKAVERKKEMQGKAKG--- 486
            .||.||.|:.:...||    .::|:||...::.:.::         .|:.:.||...||:.|   
plant   253 FRPTPLQHYAFPMGGG----GLYLVVDDNEQFREDSFVKMQDTFPKPKSNDGKKSANGKSGGRGA 313

  Fly   487 -GGGGPRNHLNAKQEQYTWIGLIDFLRRSNMMPVVAFTLSRNRCDSNLAALQSVDLNTEKEKGAV 550
             |||||     ...:.|.   ::..:......||:.|:.||..|:.:..::..:|.||::||..|
plant   314 KGGGGP-----GDSDVYK---IVKMIMERKFEPVIIFSFSRRECEQHALSMSKLDFNTDEEKEVV 370

  Fly   551 QKFFLQCLAKLKPPDRTIPQVLVLKDALERGIGVHHSGILPILKEIVEMLFQNGLVKLLFATETF 615
            ::.|...:..|...||::|.:.::...|:|||.|||||:||::||:||:|||.||||.|||||||
plant   371 EQVFNNAMQCLNEEDRSLPAIELMLPLLQRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 435

  Fly   616 AMGVNMPARTVVFDSCKKFDGLEMRNLKPGEYIQMAGRAGRRGHDETGTAIIMCKGSVPPSME-- 678
            |||:||||:||||.:.||:||...|.:..||||||:|||||||.||.|..|||    :...||  
plant   436 AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDERGICIIM----IDEQMEMN 496

  Fly   679 -LRPMILGLPEKLQSQFILRYAVILTCL-RIE-SIKVEDIMKFSFKEFNLKLQLPTQQKQLRLAE 740
             ||.|:||.|..|.|.|.|.|..||..| |.| ....|.:::.||.:|..:..||....::...|
plant   497 TLRDMMLGKPAPLLSTFRLSYYTILNLLSRAEGQFTAEHVIRHSFHQFQHEKALPDIGNKVSKLE 561

  Fly   741 DKFAMLPTLGEHLQPLVNFYDKAVEYWKEKHRIMKFVVTQPKIQKELKAGRVIVITQGKHYNKLA 805
            ::.|:|...||  ..:..:::...:..|.:.::|..::...::...|..||::.|.:|.......
plant   562 EEAAILNASGE--AEVAEYHNLQFDIAKHEKKLMSEIIRPERVLCFLDTGRLVKIREGGTDWGWG 624

  Fly   806 ILLN--------TKSVPGKDTIYKVLVLDHQFKAKDSNSL----------QQGELYYKILSLTPR 852
            :::|        |.|.......|.|..|.|.......|..          ::||::         
plant   625 VVVNVVKNSSVGTGSASSHGGGYIVDTLLHCSTGFSENGAKPKPCPPRAGEKGEMH--------- 680

  Fly   853 NMTFQPVGIGGHTVLDIKAIDIISITKSTLKVDADAIIRNWEQRQLERFKDSPPSGSVVKAVTEL 917
                         |:.::...|.::::..:.|.:|  :|..|.||           |::.|:.||
plant   681 -------------VVPVQLPLISALSRLRISVPSD--LRPVEARQ-----------SILLALQEL 719

  Fly   918 NQLNESYIDNPDNIKYVNLSKEIIVNADSEVA-MLNYVDHLLRKVGEFLPHTNIAGFEQEFAKVY 981
            :............:|.:|:.       |:|:. :::.::.:.:|:   |.|......:.:..|.:
plant   720 SSRFPLGFPKLHPVKDMNIQ-------DTEIVDLVSQIEEVEQKL---LAHPMHKSEDDQQIKSF 774

  Fly   982 ERRMLEIHIEELRFKNSARNLTLY---PDYCNKLKVLRALKYIDELDEVTLKGKVAC--EMGQNE 1041
            :|: .|::.|..:.|:..|:..|.   .:..|:.:||:.|.:||....|.:||:.||  :.| :|
plant   775 QRK-AEVNYEIQQLKSKMRDSQLQKFRDELKNRSRVLKKLGHIDADGVVQVKGRAACLIDTG-DE 837

  Fly  1042 LLITELILCNMFNDLEPAEIAALLSGLVFQAKMQDKPVIPEALKECVAAFEQINDTI--LAEEQR 1104
            ||:|||:....||||:..::|||.|..:...|..::   .....|.....:|:.|:.  :||.|.
plant   838 LLVTELMFNGTFNDLDHHQVAALASCFIPVDKSNEQ---VNLRNELTKPLQQLQDSARKIAEIQH 899

  Fly  1105 FQAAIETD------NRLNFGLLEVVYEWARNKPFAEIMKLTTVQEGIIVRCIQQLNETLRDVKTA 1163
             :..:|.|      :.:...|::|:|.|::...||||:::|.:.||.|:|..::|:|.|..::.|
plant   900 -ECKLEIDVEEYVESTIRPFLMDVIYSWSKGASFAEIIQMTDIFEGSIIRSARRLDEFLNQLRAA 963

  Fly  1164 AIRIGNPGLQSKMEEASAAIKRDIVFTASLY 1194
            |..:|...|:||...||.:::|.|:|..|||
plant   964 AEAVGESSLESKFAAASESLRRGIMFANSLY 994

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tstNP_001262884.1 Dob10 193..1194 CDD:226947 351/1059 (33%)
DEAD 267..414 CDD:278688 87/146 (60%)
HELICc 578..658 CDD:197757 56/79 (71%)
rRNA_proc-arch 715..996 CDD:289976 50/299 (17%)
DSHCT 1025..1188 CDD:285374 54/172 (31%)
HEN2NP_565338.1 Dob10 34..995 CDD:226947 349/1041 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 124 1.000 Domainoid score I1812
eggNOG 1 0.900 - - E1_COG4581
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D176060at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100340
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.720

Return to query results.
Submit another query.