DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tst and SKIC2

DIOPT Version :10

Sequence 1:NP_524465.1 Gene:tst / 42813 FlyBaseID:FBgn0039117 Length:1197 Species:Drosophila melanogaster
Sequence 2:NP_008860.4 Gene:SKIC2 / 6499 HGNCID:10898 Length:1246 Species:Homo sapiens


Alignment Length:1243 Identity:536/1243 - (43%)
Similarity:722/1243 - (58%) Gaps:101/1243 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 PELSLHNPLPDVLP------------------------------RKFDPMRLLHAPRCPGSTKL- 53
            ||.||.:.||...|                              ||.||..||.....|..:.| 
Human    39 PESSLPHGLPPCAPDLQQEAEQLFLSSPAWLPLHGVEHSARKWQRKTDPWSLLAVLGAPVPSDLQ 103

  Fly    54 APRRDQSGHILEFVELDLEAVGANANNSMSMQREPGLLEDATRGSHSNFPFWPGGFDEQRQQIAA 118
            |.|...:|.||.:.|:.||....:|..|:|::|.||....:..|:.:.:||||||.||  ..|..
Human   104 AQRHPTTGQILGYKEVLLENTNLSATTSLSLRRPPGPASQSLWGNPTQYPFWPGGMDE--PTITD 166

  Fly   119 LDV-----SNFQFGDKLLTVPPGFSSGYDFFQSQSVTLPPVVADPSNVDLLENLEQDLDVQEWMK 178
            |:.     ....|...|||:||||..|.||......|..|.:...|  .:||.|  ||...:   
Human   167 LNTREEAEEEIDFEKDLLTIPPGFKKGMDFAPKDCPTPAPGLLSLS--CMLEPL--DLGGGD--- 224

  Fly   179 LTRSEETSSTGTPKSPKQSNV-----QLPSEEFRDVDDHIMKADLKPVLNISTTTKNFKSDWAEM 238
               .:|..:.|.|..|:...|     ..|......::|.::|.....|..........:..||..
Human   225 ---EDENEAVGQPGGPRGDTVSASPCSAPLARASSLEDLVLKEASTAVSTPEAPEPPSQEQWAIP 286

  Fly   239 VDISQPINNFKEQIPCPAMDFPFELDVFQKQAILKLEQRQYVFVAAHTSAGKTVVAEYAIALSKR 303
            ||.:.|:.:|...||.||..:.||.|||||||||.||:...|||||||||||||||||||||:::
Human   287 VDATSPVGDFYRLIPQPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQK 351

  Fly   304 DLTRTIYTSPIKALSNQKYRDFRKTFKDVGLITGDLQIEPTASCLIMTTEILRSMLYCGSDVTRD 368
            .:||||||||||||||||:||||.||.||||:|||:|:.|.||||||||||||||||.||||.||
Human   352 HMTRTIYTSPIKALSNQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRD 416

  Fly   369 LEWVIFDEVHYINNPERGHVWEEVIILLPEHVNIIMLSATVPNTLELADWVGSTKKRKVYVISTL 433
            |||||||||||||:.|||.|||||:|:||:||:||:|||||||.||.|||:|..|:|::|||||:
Human   417 LEWVIFDEVHYINDVERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTV 481

  Fly   434 KRPVPLTHFLYTGAGGKSRDDIFLLVDAQGKYLQGNYEKAVERKKEMQGK-AKGGG-------GG 490
            .|||||.|:|:||...|::.::|||:|::|.:....|..|||.|||...| |:..|       ||
Human   482 TRPVPLEHYLFTGNSSKTQGELFLLLDSRGAFHTKGYYAAVEAKKERMSKHAQTFGAKQPTHQGG 546

  Fly   491 PRNHLNAKQEQYTWIGLIDFLRRSNMMPVVAFTLSRNRCDSNLAALQSVDLNTEKEKGAVQKFFL 555
            |      .|::..::.|:..||....:|||.||.||.|||...:.|.|:||.|..||..:..|..
Human   547 P------AQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQ 605

  Fly   556 QCLAKLKPPDRTIPQVLVLKDALERGIGVHHSGILPILKEIVEMLFQNGLVKLLFATETFAMGVN 620
            :|||:|:..||.:||||.:.:.|.||:|||||||||||||||||||..||||:||||||||||||
Human   606 RCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVN 670

  Fly   621 MPARTVVFDSCKKFDGLEMRNLKPGEYIQMAGRAGRRGHDETGTAIIMCKGSVPPSMELRPMILG 685
            ||||||||||.:|.||...|:|.||||:||||||||||.|.|||.|::|||.||...:|..|::|
Human   671 MPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPEMADLHRMMMG 735

  Fly   686 LPEKLQSQFILRYAVILTCLRIESIKVEDIMKFSFKEFNLKLQLPTQQKQLRLAEDKFAML--PT 748
            .|.:|||||.|.|.:||..||:::::|||:||.||.||..:......::.|.....:...|  |.
Human   736 KPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSKAHEQALAELTKRLGALEEPD 800

  Fly   749 LGEHLQPLVNFYDKAVEYWKEKHRIMKFVVTQPKIQKELKAGRVIVITQGKHYNKLAILLNTKSV 813
            :...|..|..:|....|..:.:|.|.:.::......|.|.||||:|:...:|:|.|.::|...| 
Human   801 MTGQLVDLPEYYSWGEELTETQHMIQRRIMESVNGLKSLSAGRVVVVKNQEHHNALGVILQVSS- 864

  Fly   814 PGKDTIYKVLVLDHQFKAKD--SNSLQQGELYYKILSLTPRNMT----FQPVGIGGHTVLDIKAI 872
            .....::..|||..:..::|  .......|:.|      |.::.    |.|.|...|||:.::..
Human   865 NSTSRVFTTLVLCDKPLSQDPQDRGPATAEVPY------PDDLVGFKLFLPEGPCDHTVVKLQPG 923

  Fly   873 DIISITKSTLKVDADAIIRNWEQRQLERFKDSPPSGSVVKAVTELNQLNESYIDNPDNIKYVNLS 937
            |:.:||...|:|:.:.|:.::.:||..:||..||..:|..||.||.:|.:::...|..:..||  
Human   924 DMAAITTKVLRVNGEKILEDFSKRQQPKFKKDPPLAAVTTAVQELLRLAQAHPAGPPTLDPVN-- 986

  Fly   938 KEIIVNADSEVAMLNYVDHLL--RKVGEFLPHTNIA---GFEQEFAKVYERRMLEIHIEELRFKN 997
                   |.::..::.|:..|  ||:.|.:......   .|..::.|:.||..::..:|.|||..
Human   987 -------DLQLKDMSVVEGGLRARKLEELIQGAQCVHSPRFPAQYLKLRERMQIQKEMERLRFLL 1044

  Fly   998 SARNLTLYPDYCNKLKVLRALKYIDELDEVTLKGKVACEMGQNELLITELILCNMFNDLEPAEIA 1062
            |.::|.|.|:|..:::|||.|.|:||...|.|.|:|||.|..:|||:|||:..|..:.|.|.|||
Human  1045 SDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSSHELLLTELMFDNALSTLRPEEIA 1109

  Fly  1063 ALLSGLVFQAKMQDKPVIPEALKECV----AAFEQINDTILAEEQRFQAAIETDNRLNFGLLEVV 1123
            |||||||.|:.......:|..||:.:    |..::|.:..:|.... |...|....|||||:|||
Human  1110 ALLSGLVCQSPGDAGDQLPNTLKQGIERVRAVAKRIGEVQVACGLN-QTVEEFVGELNFGLVEVV 1173

  Fly  1124 YEWARNKPFAEIMKLTTVQEGIIVRCIQQLNETLRDVKTAAIRIGNPGLQSKMEEASAAIKRDIV 1188
            |||||..||:|:..|:...||::|||||:|.|..|.::.||..:|.|.|.:|||.|:..::||||
Human  1174 YEWARGMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIV 1238

  Fly  1189 FTASLYTE 1196
            |.|||||:
Human  1239 FAASLYTQ 1246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tstNP_524465.1 Ski2_N 33..143 CDD:465562 43/145 (30%)
Dob10 258..>755 CDD:443638 300/506 (59%)
rRNA_proc-arch 713..999 CDD:463813 77/298 (26%)
DSHCT 1025..1188 CDD:462374 73/166 (44%)
SKIC2NP_008860.4 Ski2_N 79..201 CDD:465562 44/123 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 220..246 6/31 (19%)
Dob10 309..1238 CDD:443638 450/951 (47%)
DEVH box. /evidence=ECO:0000305|PubMed:35120588 423..426 2/2 (100%)

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