DRSC/TRiP Functional Genomics Resources

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Protein Alignment tst and Mtr4

DIOPT Version :9

Sequence 1:NP_001262884.1 Gene:tst / 42813 FlyBaseID:FBgn0039117 Length:1197 Species:Drosophila melanogaster
Sequence 2:NP_524929.1 Gene:Mtr4 / 48782 FlyBaseID:FBgn0001986 Length:1055 Species:Drosophila melanogaster


Alignment Length:1127 Identity:373/1127 - (33%)
Similarity:578/1127 - (51%) Gaps:152/1127 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 YDFFQSQSVTLPPVVADPSNVDLLENLEQDLDVQEWMKLTRSEE-TSSTGTPKSPKQSNVQLPSE 204
            :|.|...:.::||...:........:..:..:.::....|.|:| |||.|.....|....:.|::
  Fly     7 FDCFDEVTPSVPPPALNQEEKPSGSSASKKGNKRQADGTTASKEATSSKGAEGDDKGDVTEEPTK 71

  Fly   205 EFR----------------------DVDDHIMKADLKP--VLNISTTTKNFKSDWAEMVDISQPI 245
            ..:                      |:||......|:.  |.::....|:...:.|...|     
  Fly    72 RLKQEASTVAVDDDNNADDEPTRTLDIDDSATLEALRTRIVTHLLDAPKSCTHEVAAHPD----- 131

  Fly   246 NNFKEQIP------CPAMDFPFELDVFQKQAILKLEQRQYVFVAAHTSAGKTVVAEYAIALSKRD 304
               :|.||      .||.::||.||.||:||||.::..|.|.|:||||||||||||||||.|...
  Fly   132 ---QEYIPLKPFSGVPAKEYPFVLDPFQRQAILCIDNSQSVLVSAHTSAGKTVVAEYAIAKSLAA 193

  Fly   305 LTRTIYTSPIKALSNQKYRDFRKTFKDVGLITGDLQIEPTASCLIMTTEILRSMLYCGSDVTRDL 369
            ..|.|||:|||||||||:|:|...||||||:|||:.|.|:||||||||||||:|||.||::.|::
  Fly   194 KQRVIYTTPIKALSNQKFREFTDEFKDVGLVTGDVTINPSASCLIMTTEILRNMLYRGSEIMREV 258

  Fly   370 EWVIFDEVHYINNPERGHVWEEVIILLPEHVNIIMLSATVPNTLELADWVGSTKKRKVYVISTLK 434
            .||:|||:||:.:.|||.||||.:||||::|..:.||||:||..:.|:||....|:..:|:.|..
  Fly   259 GWVVFDEIHYMRDKERGVVWEETLILLPDNVRYVFLSATIPNARQFAEWVCHLHKQPCHVVYTDY 323

  Fly   435 RPVPLTHFLYTGAGGKSRDDIFLLVDAQGKYLQGNYEKAV----ERKKEMQGKAKGGGGGPRNHL 495
            ||.||.|:::. |||   |.|.|:||.:|::.:.|:..|:    ...:..:|..||..||.:. .
  Fly   324 RPTPLQHYIFP-AGG---DGIHLIVDEKGQFKEDNFTTAMAVLANAGEAGKGDQKGRHGGIKG-T 383

  Fly   496 NAKQEQYTWIGLIDFLRRSNMMPVVAFTLSRNRCDSNLAALQSVDLNTEKEKGAVQKFFLQCLAK 560
            ||.|...  ..::..:...|..||:.|:.|:..|:.....:..:|.||..||..|.:.|...:..
  Fly   384 NAGQTNI--FKIVKMIMERNFAPVIIFSFSKKDCEIYAMQMAKLDFNTPDEKKLVDEVFNNAMDV 446

  Fly   561 LKPPDRTIPQVLVLKDALERGIGVHHSGILPILKEIVEMLFQNGLVKLLFATETFAMGVNMPART 625
            |...||.:|||..:...|.||||:||.|:||||||.:|:||..||:|.||||||||||:||||||
  Fly   447 LTEEDRRLPQVENVLPLLRRGIGIHHGGLLPILKETIEILFGEGLIKALFATETFAMGLNMPART 511

  Fly   626 VVFDSCKKFDGLEMRNLKPGEYIQMAGRAGRRGHDETGTAIIMCKGSVPPSMELRPMILGLPEKL 690
            |:|.:.:||||.:.|.:..||||||||||||||.|:.|..|:|....|.|::. |.::.|..:.:
  Fly   512 VLFTAPRKFDGKKFRWISSGEYIQMAGRAGRRGLDDKGIVILMIDEKVSPAVG-RDIVQGKADPI 575

  Fly   691 QSQFILRYAVILTCLRIESIKVEDIMKFSFKEFNLKLQLP-----TQQKQLRL------AEDKFA 744
            .|.|.|.|.::|..||:|.|..|.:::.||.:|..:..||     .:||.|.|      .|...|
  Fly   576 NSAFHLTYNMVLNLLRVEEINPEYMLERSFYQFQNQAALPGLHDQVEQKTLELNKLTIKDEHNIA 640

  Fly   745 MLPTLGEHLQPLVNFYDKAVEYWKEKHRIMKFVVTQPK-IQKELKAGRVIVITQGKHYNKLAILL 808
            ..    .|::..::.:.|....|          :|:|: :...|:.||::.:..|.......|:|
  Fly   641 SY----HHIRSQLDQHGKQFRQW----------ITKPQYLLPFLQPGRLVKVAAGSQEYDWGIVL 691

  Fly   809 NTKSVPGKDTIYKVLVLDHQFKAKDSNSLQQGELYYKILSLTPRNMTFQPVGIGGHTVLDIKAID 873
            |.|.   :|...|     :..||:.|.::   ::...:.....:....:|........:::..:.
  Fly   692 NFKK---QDQSRK-----NPLKAEPSVTI---DVLLHVSEAAAKTGDTEPCKPNERGCMEVVPVA 745

  Fly   874 IISITK-STLKV-------DAD---AIIRNWEQRQLERFKDSPPSGSVVKAVTELNQLNESYIDN 927
            ...||: |:::|       .||   |:::..::.: :||...||   |:..:.::|..:..:.| 
  Fly   746 HTLITQISSIRVYFPNDLRSADNRRAVLKTIQEAK-KRFPLGPP---VLNPIDDMNIKDREFRD- 805

  Fly   928 PDNIKYVNLSKEIIVNADSEVAMLNYVDHLLRKVGEFLPHTNIAGFEQEFAKVYERRMLEIHIEE 992
                         |||..|:... ...:|.|.|..|         .|:...:..::..|:..:::
  Fly   806 -------------IVNTISQFEK-RLEEHPLHKSPE---------LERIHRRYQDKVTLQKQLQD 847

  Fly   993 LRFK-NSARNLTLYPDYCNKLKVLRALKYIDELDEVTLKGKVACEMGQ-NELLITELILCNMFND 1055
            |:.: .:||:|....:..::.:|||.:.|....|.:..||:||||:.. :|||:||:|...:|||
  Fly   848 LKAELKAARSLLQMDELKHRKRVLRRMGYCKPGDVIEFKGRVACELSSADELLMTEMIFNGVFND 912

  Fly  1056 LEPAEIAALLSGLVFQAKMQDKPVIPEALKECVAAFEQINDTI--LAEEQRFQAAIETDNRLNFG 1118
            |...:..||||..|...|.          .|.|.:..:::..:  :.:..|..|.:.|:.:|:..
  Fly   913 LTAPQAVALLSCFVCDEKS----------SESVKSATELSGPLRSMQDLARRIAKVSTECKLDLD 967

  Fly  1119 -----------LLEVVYEWARNKPFAEIMKLTTVQEGIIVRCIQQLNETLRDVKTAAIRIGNPGL 1172
                       |::||..|.:...|..:.|:|.:.||.|:||:::|.|.||.:..|:..|||..|
  Fly   968 ADTYVDKFKPFLMDVVLAWCKGSSFLAVCKMTDIFEGSIIRCMRRLEELLRQMCQASKTIGNTDL 1032

  Fly  1173 QSKMEEASAAIKRDIVFTASLY 1194
            ::|..|....:||||||.||||
  Fly  1033 ENKFSEGIRLLKRDIVFAASLY 1054

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tstNP_001262884.1 Dob10 193..1194 CDD:226947 360/1072 (34%)
DEAD 267..414 CDD:278688 94/146 (64%)
HELICc 578..658 CDD:197757 55/79 (70%)
rRNA_proc-arch 715..996 CDD:289976 55/303 (18%)
DSHCT 1025..1188 CDD:285374 55/176 (31%)
Mtr4NP_524929.1 Dob10 91..1055 CDD:226947 360/1043 (35%)
DEAD 154..299 CDD:278688 93/144 (65%)
HELICc 390..554 CDD:238034 79/165 (48%)
rRNA_proc-arch 600..853 CDD:289976 55/305 (18%)
DSHCT 881..1048 CDD:285374 55/176 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466317
Domainoid 1 1.000 58 1.000 Domainoid score I2625
eggNOG 1 0.900 - - E1_COG4581
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D10875at50557
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100340
Panther 1 1.100 - - P PTHR12131
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
76.750

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