Protein Alignment tst and msk

DIOPT Version :9

• Sequence 1: NP_001262884.1
• Gene: tst / 42813
• FlyBaseID: FBgn0039117
• Length: 1197
• Species: Drosophila melanogaster
• Sequence 2: NP_524780.1
• Gene: msk / 44747
• FlyBaseID: FBgn0026252
• Length: 1049
• Species: Drosophila melanogaster
• Alignment Length: 1173
• Identity: 216/1173 - (18%)
• Similarity: 364/1173 - (31%)
• Gaps: 383/1173 - (32%)

  Fly    41 LLHAPRCPGSTKLAPRRDQSGH---ILEFVELDLEAVGANANNSMSMQREPGLLEDATRGSHSNF 102
            ||.|...|...:.....||...   |:.||...|:.|..........|.....|::....|.|:.
  Fly     9 LLRATIDPNPEQRKAAEDQLAQIHKIIGFVPTILQIVMQTTVEQPVRQAGAVYLKNLINSSWSDH 73

  Fly   103 PFWPGG------FDEQRQQIAALDVSNFQFGDKLLTVPPGFSSGYDFFQSQSVTLPPVVAD---- 157
            ...||.      .::.|..|....|.......:|:.|            ..||.:..::..
  Fly    74 EAKPGEPIPFSIHEQDRAMIRGAIVDAIVHAPELIRV------------QLSVCVNHIIKSDFPG 126

  Fly   158 --PSNVDLLENLEQDLDVQEW-------------MKLTRSEETSSTGTPKSPKQSNVQLP----- 202
              |..||.:....|:.||..|             .:..|.||.    ||.: :..|:.||
  Fly   127 RWPQVVDSISIYLQNQDVNGWNGALVTMYQLVKTYEYKRHEER----TPLN-EAMNLLLPMIYQL 186

  Fly   203 --------SEEFRDVDDHIMK---ADLKPVLNISTTTKNFKSDWAEMVDISQPINNFKEQIPCPA 256
                    ||:...:...|:|   |..:..|.:...||...|.|.|:.          .|:...|
  Fly   187 MVRLLAEQSEQSVLLQKQILKIYYALTQYTLPLDLITKEIFSQWMEIC----------RQVADRA 241

  Fly   257 MDFPFELDVFQKQAILKLEQRQYVFVAAHTSAGKTVVAEYAIALSKRDLTRTIYTSPIKALSNQK 321
            :.....||        ..|:.::.:       .||  .::|:.:..|...|  |.||...:| :|
  Fly   242 VPDSSHLD--------DDERTEFPY-------WKT--KKWALHIMVRMFER--YGSPSNVVS-EK 286

  Fly   322 YRDFRK----TFKDVGLITGDLQIEPTASCLIMTTEILRSMLYCGSDVTRDLEWVIFDEVHYINN 382
            |:.|.:    ||..     |.|::      |:...:..|:.:|....|..|:       ::|:.|
  Fly   287 YQKFAEWYLPTFSQ-----GVLEV------LLKILDQYRNRVYVSPRVLTDV-------LNYLKN 333

  Fly   383 P-ERGHVWEEVIILLPEHVNIIMLSATVPNTLELAD-----WVGSTK---KRKVYVISTLKRPVP 438
            . ...:.|:    |:..|:..::.....| .:...|     |.....   :.|..:......|||
  Fly   334 AVSHAYTWK----LIKPHMVAVIQDVIFP-IMSFTDSDQELWESDPYEYIRLKFDIFEDYATPVP 393

  Fly   439 LTHFLY------------------------TGAGGKSRDDIFLLVDAQGKYL--QGNYEKAVERK 477
            ....|.                        ..|..|.:|....::......|  :.:|...||..
  Fly   394 AAQSLLHSMCKKRKGILPKAMATIMQIITSPNADNKQKDGALHMIGTLADVLLKKASYRDQVESM 458

  Fly   478 ------KEMQGKAKGGGGGPRNHLNAKQEQYTWI-------------GLIDFLR-------RSNM 516
                  .|.|        .|..|:.|:.   .|:             .|.:.:|       ....
  Fly   459 LTTYVFPEFQ--------NPAGHMRARA---CWVLHYFCDVQIKNPQVLAEIMRLTTNALLTDKE 512

  Fly   517 MPVVA--------FTLSRNRCDSNLAA--------LQSVDLNTEKE--KGAVQKF---------- 553
            :||..        |..|::.....:.|        |.::...||.|  ...:||.
  Fly   513 LPVKVEAAIGLQMFISSQDEAPQYVEAQIKEITKELLTIIRETENEDLTNVMQKIVCTFTEQLLP 577

  Fly   554 ------------FLQCLAKLKPPDRTIPQVLVLKDALERGIGV--HHSGIL----PILKEIVEML 600
                        |.|.|...:..|......:.|.:.:|..:.|  .|..:|    ||:..:|..:
  Fly   578 VATEICQHLATTFSQVLESEEGSDEKAITAMSLLNTIETLLSVMEEHPDVLLNLHPIVINVVGHI 642

  Fly   601 FQNGLVKLLFATETFAMGVNMPARTV----------VFDSCKKFDGLE-MRNLKPG--EYIQMAG 652
            ||:.:..  |..|||::..::.|:.:          ::...|| ||:: ..::.|.  .|:.:..
  Fly   643 FQHNITD--FYEETFSLVYDLTAKAISPEMWQMLELIYQVFKK-DGIDYFIDIMPALHNYVTVDT 704

  Fly   653 RAGRRGHDETGTAIIMCKGSV--PPSMELRPMILGLPEKLQSQFILRYAVILTCL-RIESIKVED 714
            .|.....:.....:.|||..:  .|..:        ||...::  |...:||.|. :|:|:
  Fly   705 PAFLSNPNRLLAILDMCKTMLTSSPGED--------PECHAAK--LMEVIILQCKGQIDSV---- 755

  Fly   715 IMKFSFKEFNL-KLQLPTQQKQLRLAEDKFAMLPTLGEHLQPLVNFYDKA------------VEY 766
              ...|.|..| :|....|..:||....: .::..|..:.|.|::..||.            ::.
  Fly   756 --IHMFVELALSRLTREVQSSELRTMCLQ-VVIAALYYNPQLLLSILDKMSQQNNDSISAHFIKQ 817

  Fly   767 WKEKHRIMKFVVTQPKIQKELKAGRVIVITQGKHYNKLAIL-LNT------------KSVPGKDT 818
            |  .|....|:                    |.|..||.:| |.|            ..|.||..
  Fly   818 W--LHDTDCFL--------------------GIHDRKLCVLGLCTLISLGEAKPQVLSEVAGKIV 860

  Fly   819 IYKVLVLDHQFKAKDSNSLQQ--------GELYYKILSLTPRNMTFQPVGIGGHTVLDIKAIDII 875
            ...:|:.|...:|.:|.:.::        |:...:.||....:|             |..|.|.:
  Fly   861 PALILLFDGLKRAYESRAQEEEEDEEEEDGDDCEEALSSDEDDM-------------DEMAPDYL 912

  Fly   876 SITKSTLKVDADAIIRNWEQRQLERFKDSPPSGSVVKAVTELNQL-------------NESYIDN 927
            .......|...:.  ..:|.:...:..|:...|...::|.:||:.             |||.||.
  Fly   913 DKLAEFAKTKGNE--SGFEVKAEIKDDDADSDGDAEESVGDLNETGLESFTTPIDDEENESAIDE 975

  Fly   928 PDNIKYV-----------------NLS-------KEIIVNADSEVAMLNYVDHLLRKVGEF-LPH 967
            ....|.|                 ||:       :|::|.||...|...  ..|:.|.|.| .|.
  Fly   976 YWTFKEVITALSAQDQAWYALLTSNLTPEQAKALQEVVVTADQRKAAKE--SKLIEKQGGFAFPQ 1038

  Fly   968 TNI 970
            |.:
  Fly  1039 TAV 1041

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tst	NP_001262884.1	Dob10	193..1194	CDD:226947	180/993 (18%)
		DEAD	267..414	CDD:278688	28/151 (19%)
		HELICc	578..658	CDD:197757	21/98 (21%)
		rRNA_proc-arch	715..996	CDD:289976	63/328 (19%)
		DSHCT	1025..1188	CDD:285374
msk	NP_524780.1	SXM1	4..1013	CDD:227943	206/1141 (18%)
		IBN_N	24..103	CDD:281761	16/78 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG4581
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.900