Sequence 1: | NP_001262884.1 | Gene: | tst / 42813 | FlyBaseID: | FBgn0039117 | Length: | 1197 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_524333.1 | Gene: | DNApol-theta / 41571 | FlyBaseID: | FBgn0002905 | Length: | 2059 | Species: | Drosophila melanogaster |
Alignment Length: | 1262 | Identity: | 261/1262 - (20%) |
---|---|---|---|
Similarity: | 451/1262 - (35%) | Gaps: | 362/1262 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 77 NANNSMSMQREPGLLEDATRGS---HSNFPFWPGGFDEQRQQIAALDVSNFQFGDKLLTVPPGFS 138
Fly 139 SGYDFFQSQSVTLPPVV---------ADPSNVDLLENLEQDLDVQEWMKLTRSEETSSTGTPKSP 194
Fly 195 KQSNV-----------QLPSEEFRD--VDDHIMKADLKPVLNISTTTKNFKSDWAEMVDISQPIN 246
Fly 247 NFKEQIP-CPAMDFPFELDV----------------FQKQAILK--------LEQRQYVF----- 281
Fly 282 -VAAHTSAGKTVVAEYAIALSKRDLTR---TIYTSPIKALSNQKYRDFRKTFKDVGLIT------ 336
Fly 337 ----------GDLQIEPTASCLI-MTTEILRSMLYCGSDVTRDLEWVIFDEVHYINNPERGHVWE 390
Fly 391 EVIILLPE----------HVNIIMLSATVPNTLELADWVGSTKKRKVYVISTLKRPVPLTHFLYT 445
Fly 446 GAGGKSRDDIFLLVDAQGKYLQGNYEKAVERKKEMQGKAKGGGGGPRNHLNAKQEQYTWIGLIDF 510
Fly 511 LRRSNMMPVVAFTLSRNRCDS---NLAALQSVDLNTEKEKGAVQKFFL--QCLAKLKPPDRTIPQ 570
Fly 571 VL--VLKDALERGIGVHHSGILPILKEIVEMLFQNGLVKLLFATETFAMGVNMPARTVVFDSCKK 633
Fly 634 FDGLEMRNLKPGEYIQMAGRAGRRGHDETGTAIIMCK------GSVPPSMELRPMILGLPEKLQS 692
Fly 693 QFILRYAVILTCLRIESIKV----EDIMKF-------SFKEFNLKLQLPTQQKQLRLAEDKFAML 746
Fly 747 PTLGEHLQPLVNFYDKAVEYWKEKHRIMKFVVTQPKIQKELKAGRVIVITQGKHYNKLAILLNTK 811
Fly 812 SVPGKDTIYKVLVLDHQFKAKDSNSLQQGELYYKILSLTPRNMTFQPVGIGGHTVLDIKAIDIIS 876
Fly 877 ITKSTLKVDADAIIRNWEQRQLERFKDSPPSGSV--------------VKAVTELN----QLNES 923
Fly 924 YIDNPDNIKYVNLSKEIIVN-ADSEVAMLNYVDH--LLRKVGEFLPHTNIAGFEQEFAKVYERRM 985
Fly 986 LEIHIEELR------FKNSARNLTLYPDYCNKLKVLRALKYIDELDEVTLKGKVACEMGQNELLI 1044
Fly 1045 TELILCNMFNDLEPAEIAALL-SGLVF-QAKMQDKPVIPEALKECVA-----------AFEQIND 1096
Fly 1097 TILAEEQRFQAAIETDNRLNFGLLEVVYEWARNKPFAEIMKLTTVQEGIIVRCIQQLNETLRDVK 1161
Fly 1162 TAAIRIGNP-GLQSKMEEASAAIKRDI 1187 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
tst | NP_001262884.1 | Dob10 | 193..1194 | CDD:226947 | 232/1134 (20%) |
DEAD | 267..414 | CDD:278688 | 44/190 (23%) | ||
HELICc | 578..658 | CDD:197757 | 32/79 (41%) | ||
rRNA_proc-arch | 715..996 | CDD:289976 | 53/314 (17%) | ||
DSHCT | 1025..1188 | CDD:285374 | 30/177 (17%) | ||
DNApol-theta | NP_524333.1 | BRR2 | 209..978 | CDD:224125 | 196/930 (21%) |
DEAD | 251..404 | CDD:278688 | 41/165 (25%) | ||
HELICc | 542..616 | CDD:197757 | 32/77 (42%) | ||
PolA | 1489..2055 | CDD:223820 | |||
DNA_pol_A_theta | 1668..2053 | CDD:176475 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45466310 | |
Domainoid | 1 | 1.000 | 45 | 1.000 | Domainoid score | I721 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.840 |