DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tst and mtrex

DIOPT Version :10

Sequence 1:NP_524465.1 Gene:tst / 42813 FlyBaseID:FBgn0039117 Length:1197 Species:Drosophila melanogaster
Sequence 2:NP_999933.1 Gene:mtrex / 406795 ZFINID:ZDB-GENE-040426-2854 Length:1034 Species:Danio rerio


Alignment Length:1101 Identity:383/1101 - (34%)
Similarity:571/1101 - (51%) Gaps:178/1101 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 TSSTGTPKS-------------PKQSNVQLPSEEFRDVDDH-------IMKADLKPV----LNIS 225
            :|....|||             |:..:..|..   ||.||.       ..:..|:.|    :|:|
Zfish    20 SSKKAAPKSAANAGKTPDKAGKPQGDSASLRK---RDADDDGPDEMLLGKRQKLETVSAEEINLS 81

  Fly   226 TTTKNFKSDWAEMV-----DISQPINN----FKEQIPCPAMDFPFELDVFQKQAILKLEQRQYVF 281
            ......||:..|.|     ::..|.|.    .|.::...|.::||.||.||::|||.::..|.|.
Zfish    82 ELMPKVKSEQVETVEGCTHEVVLPANEEYTPLKPRVGKAAKEYPFILDPFQREAILCIDNNQSVL 146

  Fly   282 VAAHTSAGKTVVAEYAIALSKRDLTRTIYTSPIKALSNQKYRDFRKTFKDVGLITGDLQIEPTAS 346
            |:|||||||||.|||||||:.|:..|.|:|||||||||||||:..:.|:||||:|||:.|.||||
Zfish   147 VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTINPTAS 211

  Fly   347 CLIMTTEILRSMLYCGSDVTRDLEWVIFDEVHYINNPERGHVWEEVIILLPEHVNIIMLSATVPN 411
            ||:|||||||||||.||:|.|::.||||||:||:.:.|||.||||.|||||::|:.:.|||||||
Zfish   212 CLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVHHVFLSATVPN 276

  Fly   412 TLELADWVGSTKKRKVYVISTLKRPVPLTHFLYTGAGGKSRDDIFLLVDAQGKYLQGNYEKAVE- 475
            ..:.|:|:....|:..:|:.|..||.||.|:::. |||   |.:.|:||..|::.:.|:..|:: 
Zfish   277 ARQFAEWICHLHKQPCHVVYTDYRPTPLQHYIFP-AGG---DGLHLVVDENGEFREDNFNTAMQV 337

  Fly   476 ------------RKKEMQGKAKGGGGGPRNHLNAKQEQYTWIGLIDFLRRSNMMPVVAFTLSRNR 528
                        .|.:.:|: |||..||.|...          ::..:...|..||:.|:.|:..
Zfish   338 LRDAGDTGGNTGAKWDPKGR-KGGTKGPSNVFK----------IVKMIMERNFQPVIIFSFSKKE 391

  Fly   529 CDSNLAALQSVDLNTEKEKGAVQKFFLQCLAKLKPPDRTIPQVLVLKDALERGIGVHHSGILPIL 593
            |::....:..:|.||::||..|::.|......|...|:.:|||..:...|:||||:||.|:||||
Zfish   392 CEAYALQVSKLDFNTDEEKKLVEEVFNNATDCLSDEDKKLPQVEHVLPLLKRGIGIHHGGLLPIL 456

  Fly   594 KEIVEMLFQNGLVKLLFATETFAMGVNMPARTVVFDSCKKFDGLEMRNLKPGEYIQMAGRAGRRG 658
            ||.:|:||..||:|.||||||||||:|||||||:|.|.:||||.:.|.:..||||||:|||||||
Zfish   457 KETIEILFSEGLLKALFATETFAMGINMPARTVLFTSARKFDGKDFRWISSGEYIQMSGRAGRRG 521

  Fly   659 HDETGTAIIMCKGSVPPSMELRPMILGLPEKLQSQFILRYAVILTCLRIESIKVEDIMKFSFKEF 723
            .||.|..|.|....:.|::. :.::.|..:.|.|.|.|.|.::|..||:|.|..|.:::.||.:|
Zfish   522 MDERGIVIFMVDEKMSPAVG-KQLLKGSADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQF 585

  Fly   724 NLKLQLPTQQKQLRLAEDKFAMLPTLGEHLQPLVNFY---------DKAVEYWKEKHR-IMKFVV 778
            .....:|....:::..|:::..:....|  :.:|.:|         .|.:|.:..|.| .:.|: 
Zfish   586 QHYRAVPGVVDRMKKLEEEYNAIRIPKE--ESVVTYYKIRQQLAKLGKEIEEFIHKPRYCLPFL- 647

  Fly   779 TQP----KIQKE-LKAGRVIVITQGKHYNKLAILLNTKSVPGKDTIYKVLVLDHQFKAKDSNSLQ 838
             ||    |::|| |..|..:|:    ::.|.:   |.|:....|.::.|.||.|..|....|:..
Zfish   648 -QPGRLVKVKKEDLDFGWGVVV----NFQKKS---NVKAGGDLDPLFVVEVLVHCSKDSVKNAAT 704

  Fly   839 QGELYYKILSLTPRNMTFQPVGIGGHTVLDIKAIDIISITKSTLKVDADAIIRNWEQRQLERFKD 903
            :        |..|..    |...|...|:.:....|.||:...|.:..|  :|.::.||      
Zfish   705 E--------SARPAG----PAEKGEMQVVPVILHLITSISSVRLYIPKD--LRPYDNRQ------ 749

  Fly   904 SPPSGSVVKAVTELNQLNESYIDNPDNIKYVNLSKEIIVNADSEVAMLNYVDHLLRKVGEFLPHT 968
                 |::|::.|:.:      ..||.|..::           .:..:...|..|:||.:     
Zfish   750 -----SMLKSIQEVQK------RFPDGIPLLD-----------PIDDMGIKDPALKKVIQ----- 787

  Fly   969 NIAGFE--------------QEFAKVYERRML---EIHIEELRFKNSARNLTLYPDYCNKLKVLR 1016
            .:..||              :...|:.|::.|   :|...:...|.:...|.:....|.| :|||
Zfish   788 KVEAFEHRMYTHPLHSDPNLEAVYKLCEKKALIAGDIKAAKRELKKARTVLQMDELKCRK-RVLR 851

  Fly  1017 ALKYIDELDEVTLKGKVACEMGQ-NELLITELILCNMFNDLEPAEIAALLSGLVFQAKMQDKPVI 1080
            .|.:....|.:.:||:||||... :|||:||::...:||||...:..||||..|||....:.|.:
Zfish   852 RLGFATSSDVIEMKGRVACETSSGDELLLTEMMFNGLFNDLTAEQATALLSCFVFQENANEMPKL 916

  Fly  1081 PEAL-------KECVAAFEQINDTILAEEQRFQAAIETD-----NRLNFGLLEVVYEWARNKPFA 1133
            .|.|       :||.....:::         .:|.:|.|     |:....|::|||.||....|:
Zfish   917 TEQLGGPLRQMQECAKRIAKVS---------AEAKLEVDEDSYLNQFRPHLMDVVYTWANGSSFS 972

  Fly  1134 EIMKLTTVQEGIIVRCIQQLNETLRDVKTAAIRIGNPGLQSKMEEASAAIKRDIVFTASLY 1194
            :|.|:|.|.||.|:||:::|.|.||.:..||..|||..|::|.......|||||||.||||
Zfish   973 QICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFATGITKIKRDIVFAASLY 1033

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tstNP_524465.1 Ski2_N 33..143 CDD:465562
Dob10 258..>755 CDD:443638 229/509 (45%)
rRNA_proc-arch 713..999 CDD:463813 62/317 (20%)
DSHCT 1025..1188 CDD:462374 63/175 (36%)
mtrexNP_999933.1 Dob10 115..1006 CDD:443638 346/974 (36%)
Blue background indicates that the domain is not in the aligned region.

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