DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tst and SPAC17H9.02

DIOPT Version :9

Sequence 1:NP_001262884.1 Gene:tst / 42813 FlyBaseID:FBgn0039117 Length:1197 Species:Drosophila melanogaster
Sequence 2:NP_593572.1 Gene:SPAC17H9.02 / 2542173 PomBaseID:SPAC17H9.02 Length:1030 Species:Schizosaccharomyces pombe


Alignment Length:1140 Identity:373/1140 - (32%)
Similarity:581/1140 - (50%) Gaps:182/1140 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 DVSNFQFGDKLLTVPPGFSSGYDFFQSQSVTLPPVVADPSNVDLLENLEQDLDVQEWMK--LTRS 182
            |..|||           ||.|               :..|:.|.|:.|.:|.:.:|..|  .:.|
pombe     7 DSKNFQ-----------FSEG---------------SRESSNDELKVLLRDTETKEDEKSSFSNS 45

  Fly   183 EE------TSSTGTPKSPKQSNVQLPSEEFRDVDDHIMKAD-LKPVLNISTTTKNFKSDWAEMVD 240
            ||      .|.:...|...:::::|        .|.:.::. |.|:|......::|......:.|
pombe    46 EEESIIENLSDSSVNKEYAKNSLKL--------SDAVSESKYLNPLLKDKRHDRSFALHKVVVPD 102

  Fly   241 ISQ--PINNFKEQIPC--PAMDFPFELDVFQKQAILKLEQRQYVFVAAHTSAGKTVVAEYAIALS 301
            ...  |:|   :.||.  ||..:|||||.||..||..:|:.:.|.|:|||||||||:||||||.:
pombe   103 DYDYIPLN---KHIPSDPPAKTYPFELDPFQSTAIKCVERMESVLVSAHTSAGKTVIAEYAIAQA 164

  Fly   302 KRDLTRTIYTSPIKALSNQKYRDFRKTFKDVGLITGDLQIEPTASCLIMTTEILRSMLYCGSDVT 366
            .::..|.|||||||:|||||||:....|.||||:|||:.|.|:||||||||||||:|||..|::.
pombe   165 LKNRQRVIYTSPIKSLSNQKYRELLSEFGDVGLMTGDVSINPSASCLIMTTEILRAMLYKNSEIM 229

  Fly   367 RDLEWVIFDEVHYINNPERGHVWEEVIILLPEHVNIIMLSATVPNTLELADWVGSTKKRKVYVIS 431
            .::.|||||||||:.:.:||.||||.:||||:.:..|.||||:||.|:.|.|:....|:..:|:.
pombe   230 HEIAWVIFDEVHYMRDKDRGVVWEETLILLPDAIRFIFLSATLPNALQFARWISEIHKQPCHVVY 294

  Fly   432 TLKRPVPLTHFLYTGAGGKSRDDIFLLVDAQGKYLQGNYEKAVERKKEMQGKAKGGGGGPRNHLN 496
            |..||.||.||:|.    :..|.|::|||.:.|:...|::|.:|               ..:| :
pombe   295 TDYRPTPLQHFIYP----QGADGIYMLVDEKNKFKTENFKKVLE---------------VLDH-S 339

  Fly   497 AKQEQYTWIG-----------LIDFLRRSNMMPVVAFTLSRNRCDSNLAALQSVDLNTEKEKGAV 550
            .:||.|:...           :|:.:..:...|::.|..|:..|:.|......:|||..:.|..|
pombe   340 TRQENYSKSSKKVKKSSSLERIINMVLSNRYDPIIVFCFSKKECEINAHQFGKLDLNDTENKELV 404

  Fly   551 QKFFLQCLAKLKPPDRTIPQVLVLKDALERGIGVHHSGILPILKEIVEMLFQNGLVKLLFATETF 615
            .:.|...:.:|...||.:.|...::..|.||||:||||:||||||:||:|||.|||::|||||||
pombe   405 TEIFDSAINQLSEEDRGLRQFEEMRSLLLRGIGIHHSGLLPILKELVEILFQEGLVRILFATETF 469

  Fly   616 AMGVNMPARTVVFDSCKKFDGLEMRNLKPGEYIQMAGRAGRRGHDETGTAIIMCKGSVPPSMELR 680
            ::|:|||||||:|...:||.|...|.|..|||:||:|||||||.|..|.:|::...|: .....|
pombe   470 SIGLNMPARTVLFTKAQKFSGNNFRWLTSGEYMQMSGRAGRRGIDTKGLSIVILDQSI-DEQAAR 533

  Fly   681 PMILGLPEKLQSQFILRYAVILTCLRIESIKVEDIMKFSFKEFNLKLQLPTQQKQLRLAEDKFAM 745
            .::.|..:.|.|.|.|.|.:||..:|||.|..|||:|.||.:|.....||..:::|...:::...
pombe   534 CLMNGQADVLNSAFHLSYGMILNLMRIEEISPEDILKKSFYQFQNMESLPLIKEELMQLKNEETS 598

  Fly   746 LPTLGEHLQPLVNFYDKAVEYWKEKHRIMKFVVTQP-KIQKELKAGRVIVITQGKHYNKLAILLN 809
            :....|  ..:..|:|..::..|....|.| |:|.| .....|::||:|.|..|.......:|:|
pombe   599 INIPNE--TAVKEFHDLKLQLEKYGEEIQK-VMTHPDNCLPYLQSGRLIQIKLGGIIFPWGVLVN 660

  Fly   810 T-----------KSVPGKDTIYKVLVLDHQFKAKDSNSLQQGELYYKILSLTPR-NMTFQPVGIG 862
            .           :..|.:..:..||:      ...|||:...::...|| :.|| |.|  |:   
pombe   661 VIKREFDPNTREQVAPHETYVLDVLL------PISSNSMSNHKVNPSIL-VPPRPNET--PL--- 713

  Fly   863 GHTVLDIKAIDIISITKSTLKVDADAIIRNWEQRQLERFKDSPPSGSVVKAVTELNQLNESYIDN 927
             :.::.:....:.:|:.          ||.:..|:|.      .:.|.::|...:|::.|.:.:.
pombe   714 -YEIVSVLLTAVCNISS----------IRIYMPRELN------SNESKLRAYRRVNEVIEEFKEI 761

  Fly   928 P--DNIKYVNLSKEIIVNADSEVAMLNYVDHLLRKVGEFL-------PHTNIAGFEQEFAKVYER 983
            |  |.::::::        :|....|:     |||: |.|       |:...:....|:.:..::
pombe   762 PYLDPLEHMHI--------ESSTLSLS-----LRKL-EILEPKLFDSPYYKDSKHRAEYHEFRKK 812

  Fly   984 RMLEIHIEELRFKNS-------ARNLTLYPDYCNKLKVLRALKYIDELDEVTLKGKVACEM-GQN 1040
            ..|...|:::..|.:       .|.|.:      :.:|||.|.:....:.:.:||:||||: ..:
pombe   813 LNLRAQIKDISTKITNTEAIIQLRELKI------RQRVLRRLGFCTLENVIDIKGRVACEITSGD 871

  Fly  1041 ELLITELILCNMFNDLEPAEIAALLSGLVFQAKMQDKPVIPEALKECVAAFEQINDTILAEEQRF 1105
            |||:.|||....||.:.|.||||.||..|::.|.:   |....|||   .|:::..||:...:|.
pombe   872 ELLLVELIFQGFFNQMPPEEIAAALSCFVYEDKSE---VSTLNLKE---PFKKMYLTIIEAAKRI 930

  Fly  1106 QAAIETDNRLNFG-----------LLEVVYEWARNKPFAEIMKLTTVQEGIIVRCIQQLNETLRD 1159
             |.:..:::|.|.           ::|.|..|.....|.||..::.:.||.|||..::|:|.|:.
pombe   931 -ATVSLESKLQFNESDYLHQFKPDIMEPVSLWINGASFQEICIVSKLYEGSIVRTFRRLDELLKQ 994

  Fly  1160 VKTAAIRIGNPGLQSKMEEASAAIKRDIVFTASLY 1194
            ::.|||.:||..|:.|.......:.|||:|:||||
pombe   995 LEHAAIVLGNNELKEKSVLTEQKLHRDIIFSASLY 1029

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tstNP_001262884.1 Dob10 193..1194 CDD:226947 352/1057 (33%)
DEAD 267..414 CDD:278688 88/146 (60%)
HELICc 578..658 CDD:197757 54/79 (68%)
rRNA_proc-arch 715..996 CDD:289976 60/302 (20%)
DSHCT 1025..1188 CDD:285374 57/174 (33%)
SPAC17H9.02NP_593572.1 Dob10 5..1030 CDD:226947 373/1140 (33%)
DEAD 128..277 CDD:278688 89/148 (60%)
HELICc 358..522 CDD:238034 75/163 (46%)
rRNA_proc-arch 568..826 CDD:289976 60/303 (20%)
DSHCT 855..1023 CDD:285374 57/174 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG4581
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100340
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.710

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