DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tst and mtr4

DIOPT Version :9

Sequence 1:NP_001262884.1 Gene:tst / 42813 FlyBaseID:FBgn0039117 Length:1197 Species:Drosophila melanogaster
Sequence 2:NP_001342839.1 Gene:mtr4 / 2541639 PomBaseID:SPAC6F12.16c Length:1117 Species:Schizosaccharomyces pombe


Alignment Length:1205 Identity:402/1205 - (33%)
Similarity:603/1205 - (50%) Gaps:182/1205 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 VELDLEAVGANANNSMSMQREPGLLEDATRGSHSNFPFWPGGFDEQRQQIAALDVSNFQFGDKLL 131
            |...|:....|:.||.:.|:....|.|.                         :.||.:.|.|.|
pombe    17 VPKSLKEESKNSQNSQNSQKIKRTLTDK-------------------------NASNQEQGTKKL 56

  Fly   132 TVPPGFSSGYDFFQSQSVTLPPVVADPSNVDLLENLE--QDLDVQEWMKLTRSEETSSTGTPKSP 194
            ....|        :.:|.|....:         |||:  |||.....:.......::...|...|
pombe    57 ESSVG--------EQESATKRAKI---------ENLKDNQDLIPNNDVNGIHINNSAVADTKHKP 104

  Fly   195 K---------QSNVQLPSE-----EFRDVDDHIMKADLKPVLNISTTTKNFKSDWAEMVDISQ-- 243
            |         .:.|.:.:|     |....|....:|.|:....:..|  ..||...|:|::..  
pombe   105 KIGDIAADDISNEVSIKNEGDTIPEATVADSFEQEASLQVAGKVGMT--EAKSSTEEVVELRHQV 167

  Fly   244 -------------PINNFKEQIPCPAMDFPFELDVFQKQAILKLEQRQYVFVAAHTSAGKTVVAE 295
                         ||:..|..|| ||..:||.||.||..:|..:|:::.|.|:||||||||||||
pombe   168 RHQVSIPPNYDYVPISKHKSPIP-PARTYPFTLDPFQAVSIACIERQESVLVSAHTSAGKTVVAE 231

  Fly   296 YAIALSKRDLTRTIYTSPIKALSNQKYRDFRKTFKDVGLITGDLQIEPTASCLIMTTEILRSMLY 360
            ||:|.|.||..|.|||||||||||||||:....|.||||:|||:.|.|.|:||:|||||||||||
pombe   232 YAVAQSLRDKQRVIYTSPIKALSNQKYRELLAEFGDVGLMTGDVTINPDATCLVMTTEILRSMLY 296

  Fly   361 CGSDVTRDLEWVIFDEVHYINNPERGHVWEEVIILLPEHVNIIMLSATVPNTLELADWVGSTKKR 425
            .||:|.|::.||||||:||:.:.|||.||||.|||||:..:.:.||||:||.::.|:|:....::
pombe   297 RGSEVMREVAWVIFDEIHYMRDKERGVVWEETIILLPDKSHFVFLSATIPNAMQFAEWITKIHRQ 361

  Fly   426 KVYVISTLKRPVPLTHFLYTGAGGKSRDDIFLLVDAQGKYLQGNYEKAVERKKEMQG-------- 482
            ..:|:.|..||.||.|:|:....    |.|.|:||.:..:.:.|:::|:....|.||        
pombe   362 PCHVVYTDFRPTPLQHYLFPSGS----DGIHLVVDEKSNFREENFQRAMSALMEKQGDDPAAMAT 422

  Fly   483 -----KAKGGGGGPRNHLNAKQEQYTWIGLIDFLRRSNMMPVVAFTLSRNRCDSNLAALQSVDLN 542
                 |.|.|.||    :....:.|.   ::..:...|..||:.|:.|:..|::....:..:|:|
pombe   423 KGNAKKGKTGKGG----VKGPSDIYK---IVKMIMVKNYNPVIVFSFSKRECEALALQMSKLDMN 480

  Fly   543 TEKEKGAVQKFFLQCLAKLKPPDRTIPQVLVLKDALERGIGVHHSGILPILKEIVEMLFQNGLVK 607
            .:.|:..|...|...:.:|...||.:||:..:...|.||||:||||:||||||::|:|||.||:|
pombe   481 DQTERDLVTTIFNNAVNQLSEKDRELPQIEHILPLLRRGIGIHHSGLLPILKEVIEILFQEGLLK 545

  Fly   608 LLFATETFAMGVNMPARTVVFDSCKKFDGLEMRNLKPGEYIQMAGRAGRRGHDETGTAIIMCKGS 672
            :|||||||::|:||||:||||.:.:||||...|.:..||||||:|||||||.|:.|..|:|....
pombe   546 VLFATETFSIGLNMPAKTVVFTNVRKFDGKTFRWISGGEYIQMSGRAGRRGLDDRGIVILMIDEK 610

  Fly   673 VPPSMELRPMILGLPEKLQSQFILRYAVILTCLRIESIKVEDIMKFSFKEFNLKLQLPTQQKQLR 737
            :.|.: .:.|:.|..::|.|.|.|.|.:||..||:|.|..|.:::..|.:|...|::|..:.:|.
pombe   611 MDPPV-AKSMLKGEADRLDSAFHLSYNMILNLLRVEGISPEFMLERCFFQFQNSLEVPKLEAKLE 674

  Fly   738 LAEDKFAMLPTLGEHLQPLVNFYDKAVEYWKEKHRI-MKFVVTQPKI-QKELKAGRVIVITQGKH 800
            .::..:.....|.|  :||..::....:.  |::|. ::.||..|.. ...|:.||::.:..|..
pombe   675 ESQQHYDSFTILDE--RPLEEYHTLKTQL--ERYRTDVRTVVNHPNFCLSFLQGGRLVRVKVGNE 735

  Fly   801 YNKLAILLNTKS-----------VPGKDTIYKVLVLDHQFKAKDSNSLQQGELYYKILSLTPRNM 854
            .....:::|...           :|.:..|...||:    .|.|:..|       :|.|      
pombe   736 DFDWGVVVNVSKRPLPKGQSNEYLPQESYIVHTLVM----VASDTGPL-------RIRS------ 783

  Fly   855 TFQPVGIGGH-------TVLDIKAIDIISITKSTLKVDADAIIRNWEQRQLERFKDSPPSGSVVK 912
                    ||       ...|....:::....|:|  |..|.||.:....|   |......:|.|
pombe   784 --------GHLPEVHPPAAEDKGKFEVVPFLLSSL--DGIAHIRVFLPNDL---KSQGQKLTVGK 835

  Fly   913 AVTELNQLNESYIDNPDNIKYVNLSKEIIVNADSEVAMLNYVDHLLRKVGEFLPHTNIAGFEQEF 977
            |::|:.:.....|...|.::.:|:.:...:....:|.:|.  ..||..     |..|.:..|:::
pombe   836 ALSEVKRRFPEGITLLDPVENMNIKEPTFIKLMKKVNILE--SRLLSN-----PLHNFSELEEKY 893

  Fly   978 AKVYERRMLEIHIEELRFK-NSARNLTLYPDYCNKLKVLRALKYIDELDEVTLKGKVACEMGQNE 1041
            |:...:..|...:::|:.| :.||::....:..::.:|||.|.:....|.:.:||:||||:...:
pombe   894 AEYLRKLALLEEVKDLKKKLSKARSIMQLDELNSRKRVLRRLGFTTSDDVIEVKGRVACEISSGD 958

  Fly  1042 -LLITELILCNMFNDLEPAEIAALLSGLVFQAKMQDKPVIPEALKECVAAFEQINDTILAEEQRF 1105
             ||:||||...|||||.|.:.|||||.||||.|.:   |..:.:||.:|...:    ||.|..|.
pombe   959 GLLLTELIFNGMFNDLTPEQCAALLSCLVFQEKSE---VENQRMKEELAGPLK----ILQEMARR 1016

  Fly  1106 QAAI--ETDNRLNF---------GLLEVVYEWARNKPFAEIMKLTTVQEGIIVRCIQQLNETLRD 1159
            .|.:  |:...||.         .|:||||.||....||:|.|:|.|.||.::|..::|.|.:|.
pombe  1017 IAKVSKESKQELNEEEYVNSFKPSLMEVVYAWAHGASFAQICKMTDVYEGSLIRMFRRLEELIRQ 1081

  Fly  1160 VKTAAIRIGNPGLQSKMEEASAAIKRDIVFTASLY 1194
            :..||..|||..||.|||:..|.|.|||||:||||
pombe  1082 MVDAAKVIGNTSLQQKMEDTIACIHRDIVFSASLY 1116

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tstNP_001262884.1 Dob10 193..1194 CDD:226947 377/1075 (35%)
DEAD 267..414 CDD:278688 93/146 (64%)
HELICc 578..658 CDD:197757 54/79 (68%)
rRNA_proc-arch 715..996 CDD:289976 56/300 (19%)
DSHCT 1025..1188 CDD:285374 74/174 (43%)
mtr4NP_001342839.1 Dob10 52..1117 CDD:226947 392/1145 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 122 1.000 Domainoid score I1431
eggNOG 1 0.900 - - E1_COG4581
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100340
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.710

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