DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tst and MTREX

DIOPT Version :9

Sequence 1:NP_001262884.1 Gene:tst / 42813 FlyBaseID:FBgn0039117 Length:1197 Species:Drosophila melanogaster
Sequence 2:NP_056175.3 Gene:MTREX / 23517 HGNCID:18734 Length:1042 Species:Homo sapiens


Alignment Length:1157 Identity:384/1157 - (33%)
Similarity:587/1157 - (50%) Gaps:208/1157 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 FGDKLLTVPPGFSSGYDFFQSQSVTLPPVVADPSNVDLLENLEQDLDVQEWMKLTRSEETSSTGT 190
            |||:|.:|          |:..|.|......|           ::.|..:|           .|.
Human     5 FGDELFSV----------FEGDSTTAAGTKKD-----------KEKDKGKW-----------KGP 37

  Fly   191 P----KSPKQSNVQLPSEEF------RDVD--------------------DHIMKADLKPVLNIS 225
            |    |:.|:.:.:|.||..      ||||                    :.:..|||.|.:.:.
Human    38 PGSADKAGKRFDGKLQSESTNNGKNKRDVDFEGTDEPIFGKKPRIEESITEDLSLADLMPRVKVQ 102

  Fly   226 TTTKNFKSDWAEMV-----DISQPINN----FKEQIPCPAMDFPFELDVFQKQAILKLEQRQYVF 281
            :         .|.|     :::.|...    .|.::...|.::||.||.||::||..::..|.|.
Human   103 S---------VETVEGCTHEVALPAEEDYLPLKPRVGKAAKEYPFILDAFQREAIQCVDNNQSVL 158

  Fly   282 VAAHTSAGKTVVAEYAIALSKRDLTRTIYTSPIKALSNQKYRDFRKTFKDVGLITGDLQIEPTAS 346
            |:|||||||||.|||||||:.|:..|.|:|||||||||||||:..:.|:||||:|||:.|.||||
Human   159 VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTINPTAS 223

  Fly   347 CLIMTTEILRSMLYCGSDVTRDLEWVIFDEVHYINNPERGHVWEEVIILLPEHVNIIMLSATVPN 411
            ||:|||||||||||.||:|.|::.||||||:||:.:.|||.||||.|||||::|:.:.||||:||
Human   224 CLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVHYVFLSATIPN 288

  Fly   412 TLELADWVGSTKKRKVYVISTLKRPVPLTHFLYTGAGGKSRDDIFLLVDAQGKYLQGNYEKAVE- 475
            ..:.|:|:....|:..:||.|..||.||.|:::. |||   |.:.|:||..|.:.:.|:..|:: 
Human   289 ARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFP-AGG---DGLHLVVDENGDFREDNFNTAMQV 349

  Fly   476 -------RKKEMQGKAKGGGGGPRNHLNAKQEQYTWIGLIDFLRRSNMMPVVAFTLSRNRCDSNL 533
                   .|.:.:|: |||..||.|...          ::..:...|..||:.|:.|:..|::..
Human   350 LRDAGDLAKGDQKGR-KGGTKGPSNVFK----------IVKMIMERNFQPVIIFSFSKKDCEAYA 403

  Fly   534 AALQSVDLNTEKEKGAVQKFFLQCLAKLKPPDRTIPQVLVLKDALERGIGVHHSGILPILKEIVE 598
            ..:..:|.||::||..|::.|...:..|...|:.:|||..:...|:||||:||.|:||||||.:|
Human   404 LQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIE 468

  Fly   599 MLFQNGLVKLLFATETFAMGVNMPARTVVFDSCKKFDGLEMRNLKPGEYIQMAGRAGRRGHDETG 663
            :||..||:|.||||||||||:|||||||:|.:.:||||.:.|.:..||||||:|||||||.|:.|
Human   469 ILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRG 533

  Fly   664 TAIIMCKGSVPPSMELRPMILGLPEKLQSQFILRYAVILTCLRIESIKVEDIMKFSFKEFNLKLQ 728
            ..|:|....:.|::. :.::.|..:.|.|.|.|.|.::|..||:|.|..|.:::.||.:|.....
Human   534 IVILMVDEKMSPTIG-KQLLKGSADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYRA 597

  Fly   729 LPTQQKQLRLAEDKFAMLPTLGEHLQPLVNFYDKAVEYWKEKHRIMKF------VVTQPK-IQKE 786
            :|...::::.:|:::..:....|         :..|.|:|.:.::.|.      .:.:|| ....
Human   598 IPGVVEKVKNSEEQYNKIVIPNE---------ESVVIYYKIRQQLAKLGKEIEEYIHKPKYCLPF 653

  Fly   787 LKAGRVI-VITQGKHYNKLAIL-----LNTKSVPGK-DTIYKVLVLDHQFK----------AKDS 834
            |:.||:: |..:|..:....::     .|.|...|: |.:|.|.||....|          ||.:
Human   654 LQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGELDPLYVVEVLLRCSKESLKNSATEAAKPA 718

  Fly   835 NSLQQGELYYKILSLTPRNMTFQPVGIGGHTVLDIKAIDIISITKSTLKVD-ADAIIRNWEQRQL 898
            ...::||:              |.|.:..|.:..|.::.:. |.|....|| ..:::::.::.| 
Human   719 KPDEKGEM--------------QVVPVLVHLLSAISSVRLY-IPKDLRPVDNRQSVLKSIQEVQ- 767

  Fly   899 ERFKDSPPSGSVVKAVTELNQLNESYIDNPDNIKYVNLSKEIIVNADS-EVAMLNYVDHLLRKVG 962
            :||.|..|.         |:.:::..|.:..       .|::|...:: |..|.::         
Human   768 KRFPDGIPL---------LDPIDDMGIQDQG-------LKKVIQKVEAFEHRMYSH--------- 807

  Fly   963 EFLPHTNIAGFEQEFAKVYERRMLEIHIEELRFKNSARNLTLYPD--YCNKLKVLRALKYIDELD 1025
               |..|....|..:....::..:.|.|:..:.:.......|..|  .|.| :|||.|.:....|
Human   808 ---PLHNDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRK-RVLRRLGFATSSD 868

  Fly  1026 EVTLKGKVACEMGQ-NELLITELILCNMFNDLEPAEIAALLSGLVFQAKMQDKPVIPEAL----- 1084
            .:.:||:||||:.. :|||:||::...:||||...:..||||..|||....:.|.:.|.|     
Human   869 VIEMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAGPLR 933

  Fly  1085 --KECVAAFEQINDTILAEEQRFQAAIETDNRLNFG-----LLEVVYEWARNKPFAEIMKLTTVQ 1142
              :||.....:::         .:|.:|.|......     |::|||.||....||.|.|:|.|.
Human   934 QMQECAKRIAKVS---------AEAKLEIDEETYLSSFKPHLMDVVYTWATGATFAHICKMTDVF 989

  Fly  1143 EGIIVRCIQQLNETLRDVKTAAIRIGNPGLQSKMEEASAAIKRDIVFTASLY 1194
            ||.|:||:::|.|.||.:..||..|||..|::|..|....|||||||.||||
Human   990 EGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLY 1041

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tstNP_001262884.1 Dob10 193..1194 CDD:226947 368/1084 (34%)
DEAD 267..414 CDD:278688 95/146 (65%)
HELICc 578..658 CDD:197757 54/79 (68%)
rRNA_proc-arch 715..996 CDD:289976 54/306 (18%)
DSHCT 1025..1188 CDD:285374 64/175 (37%)
MTREXNP_056175.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 16..74 16/79 (20%)
Dob10 68..1042 CDD:226947 362/1062 (34%)
DEAD 144..287 CDD:278688 93/142 (65%)
DEIH box 252..255 2/2 (100%)
HELICc 374..538 CDD:238034 77/173 (45%)
rRNA_proc-arch 584..840 CDD:289976 54/308 (18%)
DSHCT 868..1035 CDD:285374 64/175 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG4581
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D176060at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100340
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.720

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