DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lsd-1 and Plin5

DIOPT Version :9

Sequence 1:NP_732904.2 Gene:Lsd-1 / 42810 FlyBaseID:FBgn0039114 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_001070816.1 Gene:Plin5 / 66968 MGIID:1914218 Length:463 Species:Mus musculus


Alignment Length:354 Identity:70/354 - (19%)
Similarity:138/354 - (38%) Gaps:65/354 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GSGL----HLEAIDRIGSIPLVESSVKRVETIYDKVKNNNRLFSWYFETAE----ATISAAYETI 63
            ||.|    ....::|:.::|||:::...|.:.|:..|:.:.|.......||    :..:.|.:..
Mouse    26 GSSLGELDQQNVVNRVVALPLVKATCTAVSSAYNSAKDRHPLLGSACRLAEHCVCSVTTCALDHA 90

  Fly    64 QPAVKLFEPSIQRLDNVMCKSLDILEQRIPLVYLPPEMMYWNTKEYMSDHLVRPVLKRADSVKQI 128
            ||.::..:|.:..::::.|:.||.||:::|.:..|.:|:..:.|    |.:.:.|....| :.|.
Mouse    91 QPLLEHLQPQLATVNDLACRGLDKLEEKLPFLQQPSDMVVTSAK----DTVAKSVTGMVD-LAQR 150

  Fly   129 GNAVLESPLTTYAAERIDGAFTVGDKFVDKYLVPIQTDQDQTDVKKLVSALNDNFSPIRQQLNRM 193
            |.. ....|....::.:|......:|.||::|       ..|:.:..|.|.              
Mouse   151 GRR-WSGELRRSMSQAMDMVLGKSEKLVDRFL-------PMTEAELAVLAA-------------- 193

  Fly   194 FGHKSPQEDDNEAVPDERGAIKAIHHGQRF-------SRKLKRRLTQRTIAEARALKKQSKEAIH 251
                       ||...|.|.::.....|.:       |.:|:....:.::.:.|..|.:::|.:.
Mouse   194 -----------EAEGPEVGTVEEQRQQQGYFVRLGSLSARLRHLAYEHSLGKLRQSKHRTQEMLA 247

  Fly   252 VLFYAAELI-------ATDPKQAVQKAKELWVYLSADEP--ENQARPATLEQLIVLLTRESARRV 307
            .|....|||       :..|.....|.:|||   .:..|  ||....:.:|...:.|:|.....:
Mouse   248 QLQETLELIQHMQRGASPSPTFHPPKTQELW---GSWSPCLENGRSHSEVELETLALSRSLTLEL 309

  Fly   308 VHLVNFSAHVAANIPRNLAHTTTEVAHHI 336
            .:.|:..|.....:|.:......||...:
Mouse   310 QNAVDALAGCVRGLPPSAQAKVAEVQRSV 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lsd-1NP_732904.2 Perilipin 14..>295 CDD:281086 60/300 (20%)
Plin5NP_001070816.1 Essential for lipid droplet targeting 1..188 38/174 (22%)
Interaction with LIPE. /evidence=ECO:0000269|PubMed:19717842 1..123 23/96 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..32 3/5 (60%)
Perilipin 31..383 CDD:281086 67/349 (19%)
Interaction with PNPLA2 and ABHD5 200..463 27/142 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 433..463
Necessary for mitochondria recruitment at the lipid droplet surface 444..463
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1437332at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm43339
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR14024
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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