DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lsd-1 and Plin3

DIOPT Version :9

Sequence 1:NP_732904.2 Gene:Lsd-1 / 42810 FlyBaseID:FBgn0039114 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_080112.1 Gene:Plin3 / 66905 MGIID:1914155 Length:437 Species:Mus musculus


Alignment Length:383 Identity:73/383 - (19%)
Similarity:150/383 - (39%) Gaps:62/383 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 IDRIGSIPLVESSVKRVETIYDKVKNNNRLFSWYFETAEATI----SAAYETIQPAVKLFEPSIQ 75
            :||:..:||:.|:...|...|...|.|........:.||..:    :||..|.||.:...||.|.
Mouse    26 VDRVAGLPLISSTYGMVSAAYTSTKENYPHVRTVCDVAEKGVKTLTTAAVSTAQPILSKLEPQIA 90

  Fly    76 RLDNVMCKSLDILEQRIPLVYLPPEMMYWNTKEYMSDHLVRPVLKRADSVKQIGNAVLESPLTTY 140
            .......:.||.|::.:|::..|.|.:..:|||.:|..:       :.:.:.:.::|..:..|  
Mouse    91 TASEYAHRGLDRLQESLPILQQPTEKVLADTKELVSSTV-------SGAQEMVSSSVSSAKET-- 146

  Fly   141 AAERIDGAFTVGDKFVDKYLVPIQTDQDQTD--------------VKKLV-----------SALN 180
            .|.|:.||       ||..|..:|...|:|.              |.::|           .|..
Mouse   147 VATRVTGA-------VDVTLGAVQNSVDKTKSAMTSGVQSVMGSRVGQMVISGVDRVLVKSEAWA 204

  Fly   181 DNFSPIRQQLNRMFGHKSPQEDDNEAVPDERGAIKAIHHGQRFSRKLKRRLTQRTIAEARALKKQ 245
            ||..|:.:....:.. ..|::.|..::..:|............|.:|:....:.::.:.:..:::
Mouse   205 DNRLPLTEAELALIA-TPPEDSDMASLQQQRQEQNYFVRLGSLSERLRNHAYEHSLGKLQNARQK 268

  Fly   246 SKEAIHVLFYAAELIATDPKQAV--------QKAKELWVYLSADEPE----NQARPATLEQLIVL 298
            ::|.:..|.....|:.: .||.|        :|..::|:..:...|:    :.|:|..:|...:.
Mouse   269 AQETLQQLTSVLGLMES-VKQGVDQRLGEGQEKLHQMWLSWNQKTPQDAEKDPAKPEQVEARALS 332

  Fly   299 LTRESARRVVHLVNFSAHVAANIPRNLAHTTTEVAHHIIYINHRIITISRLDKVKTIS 356
            :.|:..::   |.:....:.|:|....:|...:.......:|....|.|.:...:.:|
Mouse   333 MFRDITQQ---LQSMCVALGASIQGLPSHVREQAQQARSQVNDLQATFSGIHSFQDLS 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lsd-1NP_732904.2 Perilipin 14..>295 CDD:281086 64/320 (20%)
Plin3NP_080112.1 Perilipin 19..415 CDD:281086 73/383 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1437332at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR14024
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4632
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.050

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