DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lsd-1 and Plin3

DIOPT Version :10

Sequence 1:NP_732904.2 Gene:Lsd-1 / 42810 FlyBaseID:FBgn0039114 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_080112.1 Gene:Plin3 / 66905 MGIID:1914155 Length:437 Species:Mus musculus


Alignment Length:383 Identity:73/383 - (19%)
Similarity:150/383 - (39%) Gaps:62/383 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 IDRIGSIPLVESSVKRVETIYDKVKNNNRLFSWYFETAEATI----SAAYETIQPAVKLFEPSIQ 75
            :||:..:||:.|:...|...|...|.|........:.||..:    :||..|.||.:...||.|.
Mouse    26 VDRVAGLPLISSTYGMVSAAYTSTKENYPHVRTVCDVAEKGVKTLTTAAVSTAQPILSKLEPQIA 90

  Fly    76 RLDNVMCKSLDILEQRIPLVYLPPEMMYWNTKEYMSDHLVRPVLKRADSVKQIGNAVLESPLTTY 140
            .......:.||.|::.:|::..|.|.:..:|||.:|..:       :.:.:.:.::|..:..|  
Mouse    91 TASEYAHRGLDRLQESLPILQQPTEKVLADTKELVSSTV-------SGAQEMVSSSVSSAKET-- 146

  Fly   141 AAERIDGAFTVGDKFVDKYLVPIQTDQDQTD--------------VKKLV-----------SALN 180
            .|.|:.||       ||..|..:|...|:|.              |.::|           .|..
Mouse   147 VATRVTGA-------VDVTLGAVQNSVDKTKSAMTSGVQSVMGSRVGQMVISGVDRVLVKSEAWA 204

  Fly   181 DNFSPIRQQLNRMFGHKSPQEDDNEAVPDERGAIKAIHHGQRFSRKLKRRLTQRTIAEARALKKQ 245
            ||..|:.:....:.. ..|::.|..::..:|............|.:|:....:.::.:.:..:::
Mouse   205 DNRLPLTEAELALIA-TPPEDSDMASLQQQRQEQNYFVRLGSLSERLRNHAYEHSLGKLQNARQK 268

  Fly   246 SKEAIHVLFYAAELIATDPKQAV--------QKAKELWVYLSADEPE----NQARPATLEQLIVL 298
            ::|.:..|.....|:.: .||.|        :|..::|:..:...|:    :.|:|..:|...:.
Mouse   269 AQETLQQLTSVLGLMES-VKQGVDQRLGEGQEKLHQMWLSWNQKTPQDAEKDPAKPEQVEARALS 332

  Fly   299 LTRESARRVVHLVNFSAHVAANIPRNLAHTTTEVAHHIIYINHRIITISRLDKVKTIS 356
            :.|:..::   |.:....:.|:|....:|...:.......:|....|.|.:...:.:|
Mouse   333 MFRDITQQ---LQSMCVALGASIQGLPSHVREQAQQARSQVNDLQATFSGIHSFQDLS 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lsd-1NP_732904.2 Perilipin 14..>285 CDD:460784 61/310 (20%)
Plin3NP_080112.1 Perilipin 18..429 CDD:460784 73/383 (19%)

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