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Protein Alignment Lsd-1 and zgc:77486
DIOPT Version :9
Sequence 1: | NP_732904.2 |
Gene: | Lsd-1 / 42810 |
FlyBaseID: | FBgn0039114 |
Length: | 431 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_998037.1 |
Gene: | zgc:77486 / 405808 |
ZFINID: | ZDB-GENE-040426-2056 |
Length: | 238 |
Species: | Danio rerio |
Alignment Length: | 166 |
Identity: | 34/166 - (20%) |
Similarity: | 61/166 - (36%) |
Gaps: | 34/166 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 162 PIQTDQDQTDVKKLVSALNDNFSPIRQQLNRM----------FGHKSPQEDDNEAVPDERG---- 212
|:.|.:..|..::..|:.:. ||:.||:..| ......:|::.|......|
Zfish 73 PLPTTEAGTPTEERTSSSSP--SPVTQQMTAMSISQDTATTDSDRAEVEEEEEEGSSKSTGPVGE 135
Fly 213 AIKAIHHGQRFSRKLKRRLTQRTIAEARALKKQSKEAIHVLFYA--AELIATDPKQAVQKAKELW 275
|.:|...|.:...|.|::....|..:...|..:|:....|.|.. |.:::.:..|.|:|
Zfish 136 AAQASSDGDQTPDKNKKKNRCFTCRKKVGLTGKSQGKSFVFFNKGWAFILSMNRLQDVKK----- 195
Fly 276 VYLSADEPENQARPATLEQLIVLLTRESARRVVHLV 311
:|.|..|....:|.|||...:..|:
Zfish 196 -----------SRFAAKEVNFNVLLRESTNILCSLI 220
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Lsd-1 | NP_732904.2 |
Perilipin |
14..>295 |
CDD:281086 |
29/148 (20%) |
zgc:77486 | NP_998037.1 |
zf-A20 |
12..35 |
CDD:280010 |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR14024 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
2 | 2.010 |
|
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