DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lsd-1 and Lsd-1

DIOPT Version :10

Sequence 1:NP_732904.2 Gene:Lsd-1 / 42810 FlyBaseID:FBgn0039114 Length:431 Species:Drosophila melanogaster
Sequence 2:XP_061498077.1 Gene:Lsd-1 / 1273078 VectorBaseID:AGAMI1_013991 Length:490 Species:Anopheles gambiae


Alignment Length:493 Identity:216/493 - (43%)
Similarity:292/493 - (59%) Gaps:82/493 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SGL-HLEAIDRIGSIPLVESSVKRVETIYDKVKNNNRLFSWYFETAEATISAAYETIQPAVKLFE 71
            ||| .:|::.|..|||:||:.:|...::|::||.:|.|.:|.|||||:...|..::::||.|:.:
Mosquito    11 SGLPQMESLSRFSSIPVVETGIKTAGSVYERVKASNGLLTWGFETAESLTYALIDSLRPATKMIQ 75

  Fly    72 PSIQRLDNVMCKSLDILEQRIPLVYLPPE----MMYWNTKEYMSDHLVRPVLKRADSVKQIGNAV 132
            ..:.:||::||||||::||::|.:|||||    ||:|||||||||||::|||.||:|:|.:|:||
Mosquito    76 GPLHQLDSIMCKSLDLVEQKVPSMYLPPEMVRLMMFWNTKEYMSDHLMKPVLSRANSMKNLGHAV 140

  Fly   133 LESPLTTYAAERIDGAFTVGDKFVDKYLVPIQTDQDQTDVKKLVS-------------------- 177
            |||.::.|||.|||||..|.||:|::|| |.: .|||.|..:.||                    
Mosquito   141 LESRVSNYAAGRIDGALVVCDKYVERYL-PTE-PQDQPDSYQPVSLRRARSWQQHGYHAIPLTCM 203

  Fly   178 ---------------------ALNDNFSPIRQQLNRMFGHKSPQEDDNEAVPDERGAIKAIHHGQ 221
                                 :::|...|.:|...|:....:|..||:    :|...:|..|.||
Mosquito   204 IPSERMIGLHATSHCMLIMCPSVHDRMGPGQQYPVRIACGAAPPADDS----NEMHVVKTFHRGQ 264

  Fly   222 RFSRKLKRRLTQRTIAEARALKKQSKEAIHVLFYAAELIATDPKQAVQKAKELWVYLSADEPENQ 286
            :.|||||||||.||..|..||||||.||:||:.||||||||:|::|:|||.|||.|||.||||||
Mosquito   265 QLSRKLKRRLTFRTRQELSALKKQSTEAVHVVAYAAELIATNPREALQKAVELWRYLSKDEPENQ 329

  Fly   287 ARPATLEQLIVLLTRESARRVVHLVNFSAHVAANIPRNLAHTTTEVAHHIIYINHRIITISRLDK 351
            |||.||||:.|||||||||::|||:||.......:|:.:...|.|:.||.::...|::....|:|
Mosquito   330 ARPRTLEQVAVLLTRESARKMVHLINFVTGAVTRVPKAVRAQTRELVHHFLFATERLMKTVHLEK 394

  Fly   352 VKTISKEEAESLFKRMLAFYGSLQGLTNAYL----------------------ERVASFLSGRME 394
            .|..:..||..|..|:...|..||..||..|                      ||:|.|||||:|
Mosquito   395 AKAATLSEASGLVHRIQHTYDDLQNQTNLALHGQLSLANIDRHDFIHWLLLKVERLAVFLSGRLE 459

  Fly   395 AEKVTGSDGGNSNHRSSRRRQDPNHYSATHN-NINGVY 431
            |||:|.|  ||     .|||..|...|...| ||||||
Mosquito   460 AEKITTS--GN-----PRRRIQPRTNSNPMNSNINGVY 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lsd-1NP_732904.2 Perilipin 14..>285 CDD:460784 141/315 (45%)
Lsd-1XP_061498077.1 None

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