DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lsd-1 and PLIN2

DIOPT Version :9

Sequence 1:NP_732904.2 Gene:Lsd-1 / 42810 FlyBaseID:FBgn0039114 Length:431 Species:Drosophila melanogaster
Sequence 2:XP_016869748.1 Gene:PLIN2 / 123 HGNCID:248 Length:445 Species:Homo sapiens


Alignment Length:430 Identity:89/430 - (20%)
Similarity:164/430 - (38%) Gaps:105/430 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 IDRIGSIPLVESSVKRVETIYDKVKNNNRLFSWYFETAEATI----SAAYETIQPAVKLFEPSIQ 75
            :.|:.::|||.|:...:.:.|...|:.........|.||..:    |.|..:..|.::..||.|.
Human    13 VTRVVNLPLVSSTYDLMSSAYLSTKDQYPYLKSVCEMAENGVKTITSVAMTSALPIIQKLEPQIA 77

  Fly    76 RLDNVMCKSLDILEQRIPLVYLPPEMMYWNTKEYMS---DHLVRPVLKRADSV---------KQI 128
            ..:...||.||.:|:|:|::..|...:..|.|..::   |.:...|....|||         |..
Human    78 VANTYACKGLDRIEERLPILNQPSTQIVANAKGAVTGAKDAVTTTVTGAKDSVASTITGVMDKTK 142

  Fly   129 G-----------------NAVLESPLTTYAAERIDGAFTVGDKFVDKYLVPIQTDQDQTDVKKLV 176
            |                 |.||.|.:....:..::.|.|..:..|::|| |:..::.:.:.||: 
Human   143 GAVTGSVEKTKSVVSGSINTVLGSRMMQLVSSGVENALTKSELLVEQYL-PLTEEELEKEAKKV- 205

  Fly   177 SALNDNFSPIRQQLNRMFGHKSPQEDDNEAVPDERGAIKAIHHGQRFSRKLKRRLTQRTIAEARA 241
                :.|..:::                   |.....:.::      |.||..|..|:.::..:.
Human   206 ----EGFDLVQK-------------------PSYYVRLGSL------STKLHSRAYQQALSRVKE 241

  Fly   242 LKKQSKEAIHVLFYAAELIATDPK------QAVQKAKE----LWV-------YLSADEPENQARP 289
            .|::|::.|..|.....||....|      |.:|.|::    .||       |...||       
Human   242 AKQKSQQTISQLHSTVHLIEFARKNVYSANQKIQDAQDKLYLSWVEWKRSIGYDDTDE------- 299

  Fly   290 ATLEQLIVLLTRESARRVVHLVNFSAHVAAN----IPRNLAHTTTEVAHHIIYINHRIITISRLD 350
            :...:.|...|...||.:...:..:.|...:    :|:|:    .:.|.|:..:...|.::.|  
Human   300 SHCAEHIESRTLAIARNLTQQLQTTCHTLLSNIQGVPQNI----QDQAKHMGVMAGDIYSVFR-- 358

  Fly   351 KVKTIS-KEEAESLFKRMLAFYGSLQGLTNAYLERVASFL 389
              ...| ||.::||   :.:..|.||.:..: |:.|..:|
Human   359 --NAASFKEVSDSL---LTSSKGQLQKMKES-LDDVMDYL 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lsd-1NP_732904.2 Perilipin 14..>295 CDD:281086 67/329 (20%)
PLIN2XP_016869748.1 Perilipin 6..395 CDD:281086 89/430 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2CMU0
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1437332at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR14024
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4632
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
54.950

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