DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lsd-1 and Plin1

DIOPT Version :10

Sequence 1:NP_732904.2 Gene:Lsd-1 / 42810 FlyBaseID:FBgn0039114 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_783571.2 Gene:Plin1 / 103968 MGIID:1890505 Length:517 Species:Mus musculus


Alignment Length:431 Identity:87/431 - (20%)
Similarity:150/431 - (34%) Gaps:103/431 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 IDRIGSIPLVESSVKRVETIYDKVKNNNRLFSWYFETAEATISAAYET-IQPAVKL----FEPSI 74
            :.|:..:|:|..:.:..:..|:..|..:.|.        |::..|||. :|.|..|    .||.:
Mouse    21 LQRVLQLPVVSGTCECFQKTYNSTKEAHPLV--------ASVCNAYEKGVQGASNLAAWSMEPVV 77

  Fly    75 QRL-------DNVMCKSLDILEQRIPLVYLPPEMMYWNTKEYMSDHLVR-------PVLKRADSV 125
            :||       :.:.|:.||.||::||.:..|||.:....|..:|..|..       |:...:|.|
Mouse    78 RRLSTQFTAANELACRGLDHLEEKIPALQYPPEKIASELKGTISTRLRSARNSISVPIASTSDKV 142

  Fly   126 KQIGNAVLESPL------TTYAAERIDGAFTVGDKFVDKYLVPIQTDQDQTDVKKLVSALNDNFS 184
            .....|..|..|      ..|||....|....|.           .|.....::|:|..|.....
Mouse   143 LGATLAGCELALGMAKETAEYAANTRVGRLASGG-----------ADLALGSIEKVVEFLLPPDK 196

  Fly   185 PIRQQLNRMFGHKSPQEDDNEAVPDERGAIKAIHHGQRFSRKLKRRLTQRTIAEARALKKQSKEA 249
            .......|....|:|     :|.|      ..:......:..|.|...|.|   |.|||:....|
Mouse   197 ESAPSSGRQRTQKAP-----KAKP------SLVRRVSTLANTLSRHTMQTT---AWALKQGHSLA 247

  Fly   250 IHV-----LFYAAELIATDPKQAVQK----AKELWVY-LSA---------------------DEP 283
            :.:     |...|:..|:...|.|.:    .:..|:: |:|                     :|.
Mouse   248 MWIPGVAPLSSLAQWGASAAMQVVSRRQSEVRVPWLHNLAASQDESHDDQTDTEGEETDDEEEEE 312

  Fly   284 ENQARPATLEQLIVLLTRESARRVVHLVNFSAHVAANIPRNLAHTTTEVAHHIIYINHRIITISR 348
            |::|....|.::..|.....      |:....|...|..||.....|.....::....||:   .
Mouse   313 ESEAEENVLREVTALPNPRG------LLGGVVHTVQNTLRNTISAVTWAPAAVLGTVGRIL---H 368

  Fly   349 LDKVKTISKEEAESLFKRMLAFYGSLQGLTNAYLERVASFL 389
            |...:.:|..:.     |.::...:|:|:|:..::.|..::
Mouse   369 LTPAQAVSSTKG-----RAMSLSDALKGVTDNVVDTVVHYV 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lsd-1NP_732904.2 Perilipin 14..>285 CDD:460784 68/325 (21%)
Plin1NP_783571.2 Perilipin 13..416 CDD:460784 87/431 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 195..216 5/31 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 286..320 5/33 (15%)
Required for interaction with CIDEC. /evidence=ECO:0000269|PubMed:23481402 290..321 3/30 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 425..490
Blue background indicates that the domain is not in the aligned region.

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