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Protein Alignment SdhD and SHH4
DIOPT Version :9
Sequence 1: | NP_651181.1 |
Gene: | SdhD / 42808 |
FlyBaseID: | FBgn0039112 |
Length: | 182 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_013265.1 |
Gene: | SHH4 / 850861 |
SGDID: | S000004154 |
Length: | 168 |
Species: | Saccharomyces cerevisiae |
Alignment Length: | 136 |
Identity: | 37/136 - (27%) |
Similarity: | 62/136 - (45%) |
Gaps: | 15/136 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 52 VAPVVREISVSAPRMASAGSSHTLLWTVERIVSAGLLAVI--PAAFIAP-SQVLDALMAISVVIH 113
|:....:.|...|...:.||.| |.|||.:|..:|.:| |.....| |...|..:::.::.|
Yeast 39 VSGTANDSSYMPPESRAQGSYH---WIVERGLSLAVLPLIAVPLVTTGPISTFTDTFLSLVLLGH 100
Fly 114 THWGVEAMVVDYMRPSVVGNVLPKVAHIALIIISVA---TLGGLFYFIQNDVGLANGIKRFWAIK 175
.|.|.::.::||:...|.| ||.|.|:.::|:. :..|::.....:.||...:|..| .
Yeast 101 CHIGFQSCIIDYISERVYG----KVHHYAMYLLSLGSFLSFVGIYKLESQEAGLIASLKSLW--D 159
Fly 176 GKDAEK 181
.|..||
Yeast 160 NKPVEK 165
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
SdhD | NP_651181.1 |
CybS |
45..173 |
CDD:283083 |
33/126 (26%) |
SHH4 | NP_013265.1 |
CybS |
26..159 |
CDD:368389 |
34/128 (27%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
48 |
1.000 |
Domainoid score |
I2986 |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4097 |
Hieranoid |
1 |
1.000 |
- |
- |
|
|
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
1 |
1.050 |
48 |
1.000 |
Inparanoid score |
I1862 |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
1 |
1.000 |
- |
- |
|
oto100102 |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_103841 |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR13337 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R310 |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
1 |
0.960 |
- |
- |
|
|
|
10 | 9.850 |
|
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