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Protein Alignment SdhD and Sdhd
DIOPT Version :9
Sequence 1: | NP_651181.1 |
Gene: | SdhD / 42808 |
FlyBaseID: | FBgn0039112 |
Length: | 182 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_080124.1 |
Gene: | Sdhd / 66925 |
MGIID: | 1914175 |
Length: | 159 |
Species: | Mus musculus |
Alignment Length: | 186 |
Identity: | 55/186 - (29%) |
Similarity: | 86/186 - (46%) |
Gaps: | 41/186 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 LSLLLRGAVRCNAANLVKSARITPLKSYSTLVANVQRKAVVQPLAVAKIVAPVVREISVSAPRMA 67
:::||:..|.|:. :.|| |.:.|..||:|..|:..:. ..|...
Mouse 1 MAVLLKLGVLCSG----QGAR-----------ALLLRSRVVRPAYVSAFLQ--------DQPTQG 42
Fly 68 SAGSSH--------------TLLWTVERIVSAGLLAVIPAAFIAPSQVLDALMAISVVIHTHWGV 118
..|:.| :|.||.||:||..||.:|||.::.|..|:|..:|.::.:|:|||:
Mouse 43 RCGTQHIHLSPSHHSGSKAASLHWTSERVVSVLLLGLIPAGYLNPCSVVDYSLAAALTLHSHWGL 107
Fly 119 EAMVVDYMRPSVVGNVLPKVAHIALIIISVATLGGLFYFIQNDVGLANGIKRFWAI 174
..:|.|| |.|:.|||.|...|:.:|..|..||.||..:|||:...:...|.:
Mouse 108 GQVVTDY----VHGDTLPKAARAGLLALSALTFAGLCYFNYHDVGICRAVAMLWKL 159
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C167840102 |
Domainoid |
1 |
1.000 |
87 |
1.000 |
Domainoid score |
I8014 |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4097 |
Hieranoid |
1 |
1.000 |
- |
- |
|
|
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
1 |
1.050 |
87 |
1.000 |
Inparanoid score |
I5135 |
Isobase |
1 |
0.950 |
- |
0 |
Normalized mean entropy |
S6445 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0006285 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
oto94708 |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_103841 |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR13337 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R310 |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X5239 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
1 |
0.960 |
- |
- |
|
|
|
14 | 13.730 |
|
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