Protein Alignment SdhD and sdhda

DIOPT Version :9

• Sequence 1: NP_651181.1
• Gene: SdhD / 42808
• FlyBaseID: FBgn0039112
• Length: 182
• Species: Drosophila melanogaster
• Sequence 2: NP_001002489.1
• Gene: sdhda / 436762
• ZFINID: ZDB-GENE-040718-192
• Length: 154
• Species: Danio rerio
• Alignment Length: 125
• Identity: 42/125 - (33%)
• Similarity: 68/125 - (54%)
• Gaps: 10/125 - (8%)

  Fly    54 PVVREISVSAP------RMASAGSSHTLLWTVERIVSAGLLAVIPAAFIAPSQVLDALMAISVVI 112
            |.:.::..:.|      ..:|.|.|.:..||.||:::..||.:.|||::.|..|:|..:|.::.:
Zfish    32 PRIGDVDYTEPAGRIHTASSSTGISASQHWTGERVMTLVLLGMAPAAYLCPGPVVDYSIAAALTM 96

  Fly   113 HTHWGVEAMVVDYMRPSVVGNVLPKVAHIALIIISVATLGGLFYFIQNDVGLANGIKRFW 172
            |.|||:..::.||    |.|.|..|:|.:.:.::|.||..||.||..|||||...:...|
Zfish    97 HGHWGIGQVLTDY----VHGEVKIKLAKVGIFLLSTATFFGLCYFNYNDVGLCKAVVMLW 152

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SdhD	NP_651181.1	CybS	45..173	CDD:283083	42/125 (34%)
sdhda	NP_001002489.1	SQR_TypeC_CybS	56..152	CDD:239576	37/99 (37%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170584269
Domainoid	1	1.000	81	1.000	Domainoid score	I8467
eggNOG	1	0.900	-	-		E1_KOG4097
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	81	1.000	Inparanoid score	I5195
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1511215at2759
OrthoFinder	1	1.000	-	-		FOG0006285
OrthoInspector	1	1.000	-	-		otm24951
orthoMCL	1	0.900	-	-		OOG6_103841
Panther	1	1.100	-	-	O	PTHR13337
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X5239
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
ZFIN	0	0.000	Not matched by this tool.
	13	12.760