DRSC/TRiP Functional Genomics Resources

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Protein Alignment SdhD and SdhD

DIOPT Version :10

Sequence 1:NP_651181.1 Gene:SdhD / 42808 FlyBaseID:FBgn0039112 Length:182 Species:Drosophila melanogaster
Sequence 2:XP_310463.5 Gene:SdhD / 1271698 VectorBaseID:AGAMI1_000270 Length:176 Species:Anopheles gambiae


Alignment Length:171 Identity:79/171 - (46%)
Similarity:106/171 - (61%) Gaps:13/171 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RGAVRCNAANLVKSARITPLKSYSTLVANVQRKAVVQPLAVAKIVAPVVREISVSAPRMASAGSS 72
            |..|...:|.|.:.|..|     .:|||...|||  ||||     :..||..:|| |...|:|.|
Mosquito    19 RTLVSGQSAALPRVAMFT-----GSLVAPAARKA--QPLA-----STTVRHFAVS-PVRCSSGGS 70

  Fly    73 HTLLWTVERIVSAGLLAVIPAAFIAPSQVLDALMAISVVIHTHWGVEAMVVDYMRPSVVGNVLPK 137
            |..||..||.:|..||.|||...:.||||.|.|:|:|||:|.|||:||:|.||:||.:.|..:||
Mosquito    71 HVTLWNAERALSVALLGVIPVGLMFPSQVGDTLIAVSVVMHQHWGLEAIVTDYVRPILFGTTVPK 135

  Fly   138 VAHIALIIISVATLGGLFYFIQNDVGLANGIKRFWAIKGKD 178
            :||..|:::|.|||||||||..||:|:|..:::.|:.|.|:
Mosquito   136 LAHGLLLLVSAATLGGLFYFNYNDIGIAGFVRKIWSTKAKE 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SdhDNP_651181.1 CybS 45..173 CDD:461624 63/127 (50%)
SdhDXP_310463.5 CybS 40..171 CDD:461624 66/130 (51%)

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