DRSC/TRiP Functional Genomics Resources

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Protein Alignment PTPMT1 and SEX4

DIOPT Version :10

Sequence 1:NP_651180.3 Gene:PTPMT1 / 42807 FlyBaseID:FBgn0039111 Length:200 Species:Drosophila melanogaster
Sequence 2:NP_566960.1 Gene:SEX4 / 824383 AraportID:AT3G52180 Length:379 Species:Arabidopsis thaliana


Alignment Length:201 Identity:42/201 - (20%)
Similarity:73/201 - (36%) Gaps:50/201 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EMSAAMFARVSFYPTLLYNVLMEKASARNWYDRIDEHVILGALPFRSQANDLIEKENMKAVVSMN 66
            :|:.||.|.:::...|..|           |:.|...:|:|:.....:..|.:.|..:|.:..:.
plant    79 DMTQAMGAVLTYRHELGMN-----------YNFIRPDLIVGSCLQTPEDVDKLRKIGVKTIFCLQ 132

  Fly    67 EDYELTAFSNNTEKWRKLGIEFLQLATTDIFESPNQEKLFRGVEFIN------KFLPLKQR---- 121
            :|.:|..|.                  .||.......|.:..::.|.      ....|:.|    
plant   133 QDPDLEYFG------------------VDISSIQAYAKKYSDIQHIRCEIRDFDAFDLRMRLPAV 179

  Fly   122 IGGLSSSYQPENVGSVYVHCKAGRTRSATLVGCYLMMKNGWTPDQA---VDHMRKCRPHILLHTK 183
            :|.|..:.: .|.|..||||.||..|:..:...|:....|:...:|   :...|.|.|.:     
plant   180 VGTLYKAVK-RNGGVTYVHCTAGMGRAPAVALTYMFWVQGYKLMEAHKLLMSKRSCFPKL----- 238

  Fly   184 QWDALR 189
              ||:|
plant   239 --DAIR 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTPMT1NP_651180.3 PTPMT1 31..194 CDD:350374 36/172 (21%)
SEX4NP_566960.1 DSP_laforin-like 96..243 CDD:350375 37/184 (20%)
E_set_AMPKbeta_like_N 256..337 CDD:199889
Blue background indicates that the domain is not in the aligned region.

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