DRSC/TRiP Functional Genomics Resources

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Protein Alignment PTPMT1 and Ptpmt1

DIOPT Version :9

Sequence 1:NP_651180.3 Gene:PTPMT1 / 42807 FlyBaseID:FBgn0039111 Length:200 Species:Drosophila melanogaster
Sequence 2:NP_079852.1 Gene:Ptpmt1 / 66461 MGIID:1913711 Length:261 Species:Mus musculus


Alignment Length:190 Identity:76/190 - (40%)
Similarity:113/190 - (59%) Gaps:18/190 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 AMFARVSFYPTLLYNVLMEKA---SARNWYDRIDEHVILGALPFRSQANDLIEKENMKAVVSMNE 67
            |..|||.|||||||.|...:.   :.|:||.|||..|:|||||.::....|:..||::.|::|||
Mouse    77 AGLARVLFYPTLLYTVFRGRVRGPAHRDWYHRIDHTVLLGALPLKNMTRRLVLDENVRGVITMNE 141

  Fly    68 DYELTAFSNNTEKWRKLGIEFLQLATTDIFESPNQEKLFRGVEFINKFLPLKQRIGGLSSSYQPE 132
            :||.....|.:::|:|.|:|.|:|:|.|:...|....|.:||:|..|:..|.|            
Mouse   142 EYETRFLCNTSKEWKKAGVEQLRLSTVDMTGVPTLANLHKGVQFALKYQALGQ------------ 194

  Fly   133 NVGSVYVHCKAGRTRSATLVGCYLMMKNGWTPDQAVDHMRKCRPHILLHTKQWDALRLFY 192
               .|||||||||:||||:|..||:..:.|:|::|::.:.|.|.||.:...|.:.|:.|:
Mouse   195 ---CVYVHCKAGRSRSATMVAAYLIQVHNWSPEEAIEAIAKIRSHISIRPSQLEVLKEFH 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTPMT1NP_651180.3 PTPMT1 31..194 CDD:350374 63/162 (39%)
Ptpmt1NP_079852.1 PTPc 149..250 CDD:304379 42/115 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 92 1.000 Domainoid score I7629
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11973
Inparanoid 1 1.050 148 1.000 Inparanoid score I4386
Isobase 1 0.950 - 0 Normalized mean entropy S5524
OMA 1 1.010 - - QHG48913
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005731
OrthoInspector 1 1.000 - - oto94814
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR46712
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3413
SonicParanoid 1 1.000 - - X4126
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.050

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