DRSC/TRiP Functional Genomics Resources

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Protein Alignment PTPMT1 and ptpmt1

DIOPT Version :10

Sequence 1:NP_651180.3 Gene:PTPMT1 / 42807 FlyBaseID:FBgn0039111 Length:200 Species:Drosophila melanogaster
Sequence 2:NP_001073656.1 Gene:ptpmt1 / 567019 ZFINID:ZDB-GENE-070112-272 Length:183 Species:Danio rerio


Alignment Length:196 Identity:79/196 - (40%)
Similarity:126/196 - (64%) Gaps:15/196 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 AAMFARVSFYPTLLYNVLMEKASARNWYDRIDEHVILGALPFRSQANDLIEKENMKAVVSMNEDY 69
            :::.||:.|||||.|||:|||.|.|.|::|:|..||||||||||...:|::.|.::.|::|||:|
Zfish     2 SSVLARILFYPTLAYNVVMEKMSYRQWFNRVDATVILGALPFRSMTEELVQNEKVRGVITMNEEY 66

  Fly    70 ELTAFSNNTEKWRKLGIEFLQLATTDIFESPNQEKLFRGVEFINKFLPLKQRIGGLSSSYQPENV 134
            |...|.|:.|:|:.:|:|.::|.|.|:...|:.|.:.:||:|     .|:.|          |..
Zfish    67 ETKYFCNSAEEWQSVGVEQIRLDTVDLTGVPSLEHIHKGVDF-----ALRHR----------EQG 116

  Fly   135 GSVYVHCKAGRTRSATLVGCYLMMKNGWTPDQAVDHMRKCRPHILLHTKQWDALRLFYTNNVETK 199
            .|||:||||||:||||:...||:..:.|:|::|...:...|||:|:.:.|.:.|:.:|....:::
Zfish   117 SSVYIHCKAGRSRSATIAAAYLIRLHCWSPEEACKMLASVRPHVLIRSSQLEMLQKYYKQVCDSE 181

  Fly   200 S 200
            |
Zfish   182 S 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTPMT1NP_651180.3 PTPMT1 31..194 CDD:350374 63/162 (39%)
ptpmt1NP_001073656.1 PTPMT1 28..176 CDD:350374 63/162 (39%)

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