DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PTPMT1 and SSH3

DIOPT Version :10

Sequence 1:NP_651180.3 Gene:PTPMT1 / 42807 FlyBaseID:FBgn0039111 Length:200 Species:Drosophila melanogaster
Sequence 2:NP_060327.3 Gene:SSH3 / 54961 HGNCID:30581 Length:659 Species:Homo sapiens


Alignment Length:185 Identity:42/185 - (22%)
Similarity:72/185 - (38%) Gaps:41/185 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EMSAAMFARVSF----YPTLLYNVLMEKASARNWYDRIDEHVILGALPFRSQANDLIEKENMKAV 62
            |:..|:..|:..    |...:.|.::...:.|:...||..|:.||:   ...|.:|.|.:..:..
Human   295 EIRQALELRLGLPLQQYRDFIDNQMLLLVAQRDRASRIFPHLYLGS---EWNAANLEELQRNRVT 356

  Fly    63 VSMNEDYELTAF------SNNTEKWRKLGIEFLQLATTDIFESPNQEKLFRGVEFINKFLPLKQR 121
            ..:|...|:..|      .:|...|.:...:.|          |:.::..|.:|        ..|
Human   357 HILNMAREIDNFYPERFTYHNVRLWDEESAQLL----------PHWKETHRFIE--------AAR 403

  Fly   122 IGGLSSSYQPENVGSVYVHCKAGRTRSATLVGCYLMMKNGWTPDQAVDHMRKCRP 176
            ..|.          .|.||||.|.:|||..|..|.|.:...:.:||:.|:::.||
Human   404 AQGT----------HVLVHCKMGVSRSAATVLAYAMKQYECSLEQALRHVQELRP 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTPMT1NP_651180.3 PTPMT1 31..194 CDD:350374 36/152 (24%)
SSH3NP_060327.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31
SSH-N 3..259 CDD:212166
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 46..96
DEK_C 272..320 CDD:462592 5/24 (21%)
DSP_slingshot_3 326..469 CDD:350419 37/154 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 482..534
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 547..603
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 617..638
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.