DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PTPMT1 and SSH1

DIOPT Version :10

Sequence 1:NP_651180.3 Gene:PTPMT1 / 42807 FlyBaseID:FBgn0039111 Length:200 Species:Drosophila melanogaster
Sequence 2:XP_011536799.1 Gene:SSH1 / 54434 HGNCID:30579 Length:1060 Species:Homo sapiens


Alignment Length:153 Identity:38/153 - (24%)
Similarity:60/153 - (39%) Gaps:31/153 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 MEKASARNWYDRIDEHVILGALPFRSQANDLIEKENMKAVVSMNEDYELTAFSNNTEKWRKLGIE 87
            |:|.|.      |.:|:.||:   ...|::|.|.:.......:|...|:..|......:.  .|.
Human   317 MDKPSL------IFDHLYLGS---EWNASNLEELQGSGVDYILNVTREIDNFFPGLFAYH--NIR 370

  Fly    88 FLQLATTDIFESPNQEKLFRGVEFINKFLPLKQRIGGLSSSYQPENVGSVYVHCKAGRTRSATLV 152
            .....|||:....|:     ...||||               ...|.....||||.|.:|||:.|
Human   371 VYDEETTDLLAHWNE-----AYHFINK---------------AKRNHSKCLVHCKMGVSRSASTV 415

  Fly   153 GCYLMMKNGWTPDQAVDHMRKCR 175
            ..|.|.:.||..::|.:::::.|
Human   416 IAYAMKEFGWPLEKAYNYVKQKR 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTPMT1NP_651180.3 PTPMT1 31..194 CDD:350374 35/145 (24%)
SSH1XP_011536799.1 SSH-N 41..248 CDD:212166
DEK_C 262..314 CDD:462592
DSP_slingshot_1 317..460 CDD:350418 38/153 (25%)
PTZ00449 <666..1055 CDD:185628
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.