DRSC/TRiP Functional Genomics Resources

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Protein Alignment PTPMT1 and Ssh2

DIOPT Version :10

Sequence 1:NP_651180.3 Gene:PTPMT1 / 42807 FlyBaseID:FBgn0039111 Length:200 Species:Drosophila melanogaster
Sequence 2:XP_038941949.1 Gene:Ssh2 / 303342 RGDID:1309389 Length:1450 Species:Rattus norvegicus


Alignment Length:282 Identity:57/282 - (20%)
Similarity:100/282 - (35%) Gaps:112/282 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 AAMFARV-SFYPTLLY---------NVLMEKASARNW-------YDRIDEHVILGALPFRSQAND 52
            |...||: ::||..|:         ::..:::|...|       ..|.|...:...:|...:..:
  Rat   214 ACEVARMHNYYPGSLFLTWVSYYESHINSDQSSVNEWNAMQDVQSHRPDSPALFTDIPTERERTE 278

  Fly    53 LIEKENMKAVVSMNEDYE-LTAFSNNTEKWRKLGI---EFLQLATTDI------FESPNQ--EKL 105
            .:.|..::.:: |.:|.| :|:....||...::..   ||.:....::      .:||.|  |.:
  Rat   279 RLIKTKLREIM-MQKDLENITSKEIRTELEMQMVCNLREFKEFIDNEMIVILGQMDSPTQIFEHV 342

  Fly   106 F---------------RGVEF-------INKFLPLKQRIGGLSSSYQPENVGSVY---------- 138
            |               |||.:       |:.|.|         ..::..|: .||          
  Rat   343 FLGSEWNASNLEDLQNRGVRYILNVTREIDNFFP---------GVFEYHNI-RVYDEEATDLLAY 397

  Fly   139 -------------------VHCKAGRTRSATLVGCYLMMKNGWTPDQAVDHMRKCR----PH--- 177
                               ||||.|.:|||:.|..|.|.:.||..|:|.:::::.|    |:   
  Rat   398 WNDTYKFISKAKKHGSKCLVHCKMGVSRSASTVIAYAMKEYGWNLDRAYEYVKERRTVTKPNPSF 462

  Fly   178 ---------ILL-----HTKQW 185
                     |||     |.|.|
  Rat   463 MRQLEEYQGILLASKQRHNKLW 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTPMT1NP_651180.3 PTPMT1 31..194 CDD:350374 50/246 (20%)
Ssh2XP_038941949.1 SSH-N 38..263 CDD:212166 9/48 (19%)
DEK_C 277..329 CDD:462592 9/52 (17%)
DSP_slingshot_2 332..475 CDD:350417 33/152 (22%)

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