DRSC/TRiP Functional Genomics Resources

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Protein Alignment PTPMT1 and Dusp16

DIOPT Version :10

Sequence 1:NP_651180.3 Gene:PTPMT1 / 42807 FlyBaseID:FBgn0039111 Length:200 Species:Drosophila melanogaster
Sequence 2:NP_001100094.1 Gene:Dusp16 / 297682 RGDID:1310721 Length:661 Species:Rattus norvegicus


Alignment Length:146 Identity:40/146 - (27%)
Similarity:61/146 - (41%) Gaps:26/146 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 RIDEHVILGALPFRSQANDLIEKENMKAVVSMNEDYELTAFSNNTEKWRKL-GIEFLQLATTDIF 97
            ||..::.||.      ..|::.||.|:   .....|.|.| ||...|...: ...||::...|.|
  Rat   161 RILPNLYLGC------QRDVLNKELMQ---QNGIGYVLNA-SNTCPKPDFIPESHFLRVPVNDSF 215

  Fly    98 ESPNQEKLFRGVEFINKFLPLKQRIGGLSSSYQPENVGSVYVHCKAGRTRSATLVGCYLMMKNGW 162
            .......|.:.|:||.|               ...:.|.|.:||.||.:||||:...|:|.:...
  Rat   216 CEKILPWLDKSVDFIEK---------------AKASNGCVLIHCLAGISRSATIAIAYIMKRMDM 265

  Fly   163 TPDQAVDHMRKCRPHI 178
            :.|:|...:::.||.|
  Rat   266 SLDEAYRFVKEKRPTI 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTPMT1NP_651180.3 PTPMT1 31..194 CDD:350374 40/146 (27%)
Dusp16NP_001100094.1 DSP_MapKP 10..136 CDD:238723
PTP_DSP_cys 158..301 CDD:475123 40/146 (27%)
Blue background indicates that the domain is not in the aligned region.

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