DRSC/TRiP Functional Genomics Resources

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Protein Alignment PTPMT1 and SPOM_SPBC17A3.06

DIOPT Version :10

Sequence 1:NP_651180.3 Gene:PTPMT1 / 42807 FlyBaseID:FBgn0039111 Length:200 Species:Drosophila melanogaster
Sequence 2:NP_595588.1 Gene:SPOM_SPBC17A3.06 / 2540146 PomBaseID:SPBC17A3.06 Length:330 Species:Schizosaccharomyces pombe


Alignment Length:175 Identity:50/175 - (28%)
Similarity:77/175 - (44%) Gaps:34/175 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 IDEHVILGALPFRSQANDLIE-KENM--------KAVVSMNE---DYELTAFSNNTEKWRKLGIE 87
            |||      :.:....|||.| .:|:        ..:||.::   ||.|:|.|.|.    .|.:.
pombe    35 IDE------VHYPDSLNDLSEISKNLYISSWKTASELVSTSDKGIDYTLSAMSINP----NLSVP 89

  Fly    88 FLQLATTDIFESPNQEKLFRGVEFINKFLPLKQRIGGLSSSYQPENVGSVYVHCKAGRTRSATLV 152
            ..|.....|.:|.:| .:.:..|..|||:..     .||.:      ..|.|||.||.:||.|||
pombe    90 EQQHLWLQIEDSSSQ-NILQYFEKSNKFIAF-----ALSKN------AKVLVHCFAGISRSVTLV 142

  Fly   153 GCYLMMKNGWTPDQAVDHMRKCRPHILLHTKQWDALRLFYTNNVE 197
            ..|||.:|.|..::|:.|:.:.|..|..:......||:::..|.:
pombe   143 AAYLMKENNWNTEEALSHINERRSGISPNANFLRQLRVYFECNYQ 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTPMT1NP_651180.3 PTPMT1 31..194 CDD:350374 49/170 (29%)
SPOM_SPBC17A3.06NP_595588.1 DSPc 48..184 CDD:214551 43/151 (28%)

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