DRSC/TRiP Functional Genomics Resources

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Protein Alignment PTPMT1 and Ssh3

DIOPT Version :10

Sequence 1:NP_651180.3 Gene:PTPMT1 / 42807 FlyBaseID:FBgn0039111 Length:200 Species:Drosophila melanogaster
Sequence 2:NP_001361616.1 Gene:Ssh3 / 245857 MGIID:2683546 Length:653 Species:Mus musculus


Alignment Length:166 Identity:39/166 - (23%)
Similarity:68/166 - (40%) Gaps:43/166 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LLYNVLMEKASARNWYDRIDEHVILGALPFRSQANDLIEKENMKAVVSMNEDYE------LTAFS 75
            ||.....::||      ||..|:.||: .:.:...:.::|..:..:::|..:.:      .|.: 
Mouse   321 LLLMAQQDRAS------RIFPHLYLGS-EWNAANLEELQKNRVSHILNMAREIDNFFPERFTYY- 377

  Fly    76 NNTEKWRKLGIEFLQLATTDIFESPNQEKLFRGVEFINKFLPLKQRIGGLSSSYQPENVGSVYVH 140
             |...|.:...:.|          |:.::..|.:|        ..|..|.          .|.||
Mouse   378 -NVRVWDEESAQLL----------PHWKETHRFIE--------DARAQGT----------RVLVH 413

  Fly   141 CKAGRTRSATLVGCYLMMKNGWTPDQAVDHMRKCRP 176
            ||.|.:|||..|..|.|.:.||..:||:.|:::.||
Mouse   414 CKMGVSRSAATVLAYAMKQYGWDLEQALIHVQELRP 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTPMT1NP_651180.3 PTPMT1 31..194 CDD:350374 35/152 (23%)
Ssh3NP_001361616.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..32
SSH-N 3..256 CDD:212166
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 49..90
DEK_C 273..324 CDD:462592 2/2 (100%)
DSP_slingshot_3 327..470 CDD:350419 37/160 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 545..590
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 612..653
Blue background indicates that the domain is not in the aligned region.

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