DRSC/TRiP Functional Genomics Resources

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Protein Alignment PTPMT1 and Ssh1

DIOPT Version :10

Sequence 1:NP_651180.3 Gene:PTPMT1 / 42807 FlyBaseID:FBgn0039111 Length:200 Species:Drosophila melanogaster
Sequence 2:XP_011246495.1 Gene:Ssh1 / 231637 MGIID:2686240 Length:1073 Species:Mus musculus


Alignment Length:153 Identity:38/153 - (24%)
Similarity:60/153 - (39%) Gaps:31/153 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 MEKASARNWYDRIDEHVILGALPFRSQANDLIEKENMKAVVSMNEDYELTAFSNNTEKWRKLGIE 87
            |:|.|.      |.:|:.||:   ...|::|.|.:.......:|...|:..|......:.  .|.
Mouse   337 MDKPSL------IFDHLYLGS---EWNASNLEELQGSGVDYILNVTREIDNFFPGLFAYH--NIR 390

  Fly    88 FLQLATTDIFESPNQEKLFRGVEFINKFLPLKQRIGGLSSSYQPENVGSVYVHCKAGRTRSATLV 152
            .....|||:....|:     ...||||               ...|.....||||.|.:|||:.|
Mouse   391 VYDEETTDLLAHWNE-----AYHFINK---------------AKRNHSKCLVHCKMGVSRSASTV 435

  Fly   153 GCYLMMKNGWTPDQAVDHMRKCR 175
            ..|.|.:.||..::|.:::::.|
Mouse   436 IAYAMKEFGWPLEKAYNYVKQKR 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTPMT1NP_651180.3 PTPMT1 31..194 CDD:350374 35/145 (24%)
Ssh1XP_011246495.1 SSH-N 65..268 CDD:212166
DEK_C 282..334 CDD:462592
DSP_slingshot_1 337..480 CDD:350418 38/153 (25%)
PTZ00449 <689..1068 CDD:185628
Blue background indicates that the domain is not in the aligned region.

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