DRSC/TRiP Functional Genomics Resources

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Protein Alignment PTPMT1 and Y54F10BM.13

DIOPT Version :10

Sequence 1:NP_651180.3 Gene:PTPMT1 / 42807 FlyBaseID:FBgn0039111 Length:200 Species:Drosophila melanogaster
Sequence 2:NP_497538.1 Gene:Y54F10BM.13 / 190277 WormBaseID:WBGene00021867 Length:227 Species:Caenorhabditis elegans


Alignment Length:163 Identity:52/163 - (31%)
Similarity:72/163 - (44%) Gaps:39/163 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 MEKASARNWYDRIDEHVILG-ALP---FRSQ--ANDLIEKENMKAVVSMNEDYELTAFSNN-TEK 80
            :|....|.:...::..:::| |||   |.||  |.||...||.|....:|..   |...|: .:|
 Worm    65 VEYLQRRGFIVDLEPDLVVGEALPDLLFGSQDVAADLPILENRKITHIVNVG---TGIPNHFPKK 126

  Fly    81 WRKLGIEFLQLATT---DIFESPNQEKLFRGVEFINKFLPLKQRIGGLSSSYQPENVGSVYVHCK 142
            :..|.|:.|.|..|   |.||        |..|||:|.               .:|.|.|::||.
 Worm   127 FEYLQIDILDLPETRIIDYFE--------RVFEFIDKV---------------RQNEGIVFIHCN 168

  Fly   143 AGRTRSATLVGCYLMMKNGWTPDQAVDHMRKCR 175
            ||.:||||.|..|||.....:..:|:|   |||
 Worm   169 AGISRSATFVVAYLMKNLKISCREAMD---KCR 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTPMT1NP_651180.3 PTPMT1 31..194 CDD:350374 50/155 (32%)
Y54F10BM.13NP_497538.1 PTP_DSP_cys 83..217 CDD:475123 50/145 (34%)

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