DRSC/TRiP Functional Genomics Resources

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Protein Alignment PTPMT1 and Epm2a

DIOPT Version :10

Sequence 1:NP_651180.3 Gene:PTPMT1 / 42807 FlyBaseID:FBgn0039111 Length:200 Species:Drosophila melanogaster
Sequence 2:NP_001263691.1 Gene:Epm2a / 114005 RGDID:71047 Length:331 Species:Rattus norvegicus


Alignment Length:182 Identity:39/182 - (21%)
Similarity:70/182 - (38%) Gaps:44/182 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FYPTLLYNVLMEKASARNWYDRIDEHVILGALPFRSQANDLIEKENMKAVVSMNEDYELTAFSNN 77
            ||    :|:...:|.   .|.||..::.||:.|.:.:...:..|..:.....||...|.....|:
  Rat   145 FY----FNIAGHQAM---HYSRILPNIWLGSCPRQLEHVTIKLKHELGITAVMNFQTEWDIIQNS 202

  Fly    78 T---------------EKWRKLGIEFLQLATTDIFESPNQEKLFRGVEFINKFLPLKQRIGGLSS 127
            :               :.:::.|:.::.:.|.|:......:.|.:.|..::..|           
  Rat   203 SGCNRYPEPMTPDTMMKLYKEEGLAYIWMPTPDMSTEGRVQMLPQAVCLLHALL----------- 256

  Fly   128 SYQPENVGSVYVHCKAGRTRSATLVGCYLMMKNGWTPDQAVDHMRKCRPHIL 179
                ||..:|||||.||..||...|..:|....||:       :||.:..|:
  Rat   257 ----ENGHTVYVHCNAGVGRSTAAVCGWLHYVIGWS-------LRKVQYFIM 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTPMT1NP_651180.3 PTPMT1 31..194 CDD:350374 35/164 (21%)
Epm2aNP_001263691.1 CBM20_laforin 1..129 CDD:99881
DSP_laforin-like 155..312 CDD:350375 35/168 (21%)
Glucan phosphatase signature motif CXAGXGR. /evidence=ECO:0000250|UniProtKB:O95278 266..272 3/5 (60%)
Blue background indicates that the domain is not in the aligned region.

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