| Sequence 1: | NP_651179.1 | Gene: | Hrd3 / 42806 | FlyBaseID: | FBgn0028475 | Length: | 819 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_564992.1 | Gene: | AT1G70590 / 843396 | AraportID: | AT1G70590 | Length: | 351 | Species: | Arabidopsis thaliana |
| Alignment Length: | 237 | Identity: | 63/237 - (26%) |
|---|---|---|---|
| Similarity: | 111/237 - (46%) | Gaps: | 19/237 - (8%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 340 GQVYYQGGKVTEQDHQKALEYFKMAADAGSAVGIAFLGKLYLEGSDQIRADNDAAFGYFSKAAEM 404
Fly 405 GDPVGQSGLGLMYLKGLGVPKDSIKALSYFTQAADQGWVDGQLQLGNMYFTGNGVKTDYKLAFKY 469
Fly 470 FNLATQSGHVLAYYNLGVMNAYGMGMLRSCPAAVEFFKTVSERGRWSSRLMMAYSDYKNNRIDEA 534
Fly 535 YMQYSLMAEMGYEVAQSNAAFLLDRKEVHVFNDRHEDLIRAF 576 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Hrd3 | NP_651179.1 | TPR | 139..367 | CDD:440553 | 8/26 (31%) |
| SLR repeat | 165..194 | CDD:276807 | |||
| SLR repeat | 201..230 | CDD:276807 | |||
| SLR repeat | 238..267 | CDD:276807 | |||
| SLR repeat | 353..382 | CDD:276807 | 9/28 (32%) | ||
| TPR | 357..657 | CDD:440553 | 59/220 (27%) | ||
| SLR repeat | 390..419 | CDD:276807 | 11/28 (39%) | ||
| SLR repeat | 426..455 | CDD:276807 | 8/28 (29%) | ||
| SLR repeat | 531..559 | CDD:276807 | 6/27 (22%) | ||
| SLR repeat | 567..600 | CDD:276807 | 3/10 (30%) | ||
| SLR repeat | 607..637 | CDD:276807 | |||
| AT1G70590 | NP_564992.1 | F-box | 65..100 | CDD:425796 | |
| TPR | <110..277 | CDD:440553 | 50/171 (29%) | ||
| SLR repeat | 125..152 | CDD:276807 | 8/26 (31%) | ||
| SLR repeat | 158..185 | CDD:276807 | 10/26 (38%) | ||
| SLR repeat | 191..220 | CDD:276807 | 8/28 (29%) | ||
| SLR repeat | 227..256 | CDD:276807 | 8/28 (29%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||