DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rpt5 and AT1G53780

DIOPT Version :10

Sequence 1:NP_524464.1 Gene:Rpt5 / 42805 FlyBaseID:FBgn0028684 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_001185217.1 Gene:AT1G53780 / 841815 AraportID:AT1G53780 Length:620 Species:Arabidopsis thaliana


Alignment Length:456 Identity:187/456 - (41%)
Similarity:252/456 - (55%) Gaps:59/456 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KSIWEDGEESLGEEVMRMSTDEIVSRTRLMDNEIKIMKSEVIRITHEIQAQNEKIKDNTE----- 67
            :.|.||.|.. |...||...:.::|..||.|.|    ..::|.. ...:|..|.:.|.||     
plant   159 RDIMEDPENE-GPHNMRSDFEPLLSVLRLRDYE----TGDIIEF-DSTEASEEALSDITEFGSTE 217

  Fly    68 -------------KI-KVNKTLPYLVSNVIELLDVDPQEEEDDGSV------TVLDNQRK----- 107
                         :| ||.|.:..|...:..|    ..:|.|.|..      .|.|.|..     
plant   218 ASEAHFEQEPYSARIKKVEKEINELAEKICNL----GIKESDTGLAPPNQWDLVSDKQMMQEEQP 278

  Fly   108 ---GKCA-VIKTSTRQAYFLP--------VIGLVDAEKLKPGDL-----VGVNKDSYLILETLPA 155
               ..|. :|..:|..|.::.        |:||.|  |..|.|:     |||::..|.|...||.
plant   279 LLVATCTQIISPNTEDAKYVVDIKKIGKYVVGLGD--KASPTDIEAGMRVGVDQKKYQIQIPLPP 341

  Fly   156 EYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFKNLGIHPPKGVLLYGPPGT 220
            :.|..|..|.|:|:|...||||||..:||:::.|.|.|||.|.|||..|||.||||||.|||||:
plant   342 KIDPSVTMMTVEEKPDATYSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGS 406

  Fly   221 GKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRF 285
            ||||:|||.|.:|.:.|:::.|.:|||.:||:||::||:.|.:|:.|...|:|.||:||||..||
plant   407 GKTLVARAVANRTGACFIRVVGSELVQKYIGEGARMVRELFQMARSKKACILFFDEIDAIGGARF 471

  Fly   286 DSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEA 350
            |.....|.||||||||:|.|||||.:..:|||:.||||.|||||||||.||||||:||..|:.|.
plant   472 DDGVGSDNEVQRTMLEILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEG 536

  Fly   351 RARIMQIHSRKMNVSNDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSANSVTHEDFMDAIME 415
            |.:|.:||:|.|:...|:.||.|:....:..||..::||:||||.|:.....|||.:||:||:.:
plant   537 RTQIFKIHTRTMSCERDIRFELLAGLCPNSTGADIRSVCIEAGMYAIGARRKSVTEKDFLDAVNK 601

  Fly   416 V 416
            |
plant   602 V 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt5NP_524464.1 PRK03992 28..421 CDD:179699 180/436 (41%)
AT1G53780NP_001185217.1 cyclophilin <4..95 CDD:469651
PRK03992 278..616 CDD:179699 157/327 (48%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.