DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt5 and RPT5B

DIOPT Version :9

Sequence 1:NP_524464.1 Gene:Rpt5 / 42805 FlyBaseID:FBgn0028684 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_172384.1 Gene:RPT5B / 837431 AraportID:AT1G09100 Length:423 Species:Arabidopsis thaliana


Alignment Length:429 Identity:313/429 - (72%)
Similarity:370/429 - (86%) Gaps:7/429 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAQTLEDKSIWEDGEESLGEEVMRMSTDEIVSRTRLMDNEIKIMKSEVIRITHEIQAQNEKIKDN 65
            ||..:.:.:.:|      |:::..|:||:|...:||:.|||:|:|.|..|...::::..||||:|
plant     1 MATAMAEDTSFE------GDQLASMTTDDIGRASRLLANEIRILKEESQRTNLDLESVKEKIKEN 59

  Fly    66 TEKIKVNKTLPYLVSNVIELLDVDPQEE-EDDGSVTVLDNQRKGKCAVIKTSTRQAYFLPVIGLV 129
            .||||:||.|||||.|::|:|::.|::: |:||:...||:||||||.|:||||||..||||:|||
plant    60 QEKIKLNKQLPYLVGNIVEILEMSPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLV 124

  Fly   130 DAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLP 194
            |.:.|||||||||||||||||:|||:|||:|||||||||:|||.|:|||||:||||||:||:|||
plant   125 DPDTLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLP 189

  Fly   195 MTHKEKFKNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRD 259
            |||||:|:.|||.|||||||||||||||||:||||||||.:||||||||||||||||||||||||
plant   190 MTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRD 254

  Fly   260 AFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRV 324
            ||.|||||:|.||||||:|||||||||||.:|||||||||||||||||||||...|||||||||.
plant   255 AFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRA 319

  Fly   325 DILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSNDVNFEELSRSTDDFNGAQCKAVC 389
            |||||||:||||||||||||||.||||.||:|||||||||:.|||||||:||||||||||.||||
plant   320 DILDPALMRSGRLDRKIEFPHPTEEARGRILQIHSRKMNVNADVNFEELARSTDDFNGAQLKAVC 384

  Fly   390 VEAGMIALRRSANSVTHEDFMDAIMEVQAKKKANLNYYA 428
            |||||:||||.|..|.||||.:.|::|||||||:|||||
plant   385 VEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt5NP_524464.1 RPT1 33..421 CDD:224143 297/388 (77%)
RPT5BNP_172384.1 RPT1 28..416 CDD:224143 297/387 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 237 1.000 Domainoid score I610
eggNOG 1 0.900 - - E1_COG1222
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2097
Inparanoid 1 1.050 634 1.000 Inparanoid score I193
OMA 1 1.010 - - QHG54009
OrthoDB 1 1.010 - - D571919at2759
OrthoFinder 1 1.000 - - FOG0003626
OrthoInspector 1 1.000 - - otm2551
orthoMCL 1 0.900 - - OOG6_101915
Panther 1 1.100 - - LDO PTHR23073
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2502
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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