DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt5 and EMB3144

DIOPT Version :10

Sequence 1:NP_524464.1 Gene:Rpt5 / 42805 FlyBaseID:FBgn0028684 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_201263.2 Gene:EMB3144 / 836579 AraportID:AT5G64580 Length:855 Species:Arabidopsis thaliana


Alignment Length:447 Identity:145/447 - (32%)
Similarity:228/447 - (51%) Gaps:72/447 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 WEDGEESLGEEVMRMSTDEIVSRTRLMDNEIKIMKSEVIRITHEIQAQNEKIKDNTEKIKVNKTL 75
            ::|| |.||||  ..|..||:.|..::|.             ..|...|:..|...::| ||   
plant   181 YKDG-EPLGEE--EDSKKEIIFRRHIVDR-------------MPIDGWNDVWKKLHQQI-VN--- 225

  Fly    76 PYLVSNVIELLDVDPQEEEDDGSVTVLDNQRKGKCAVIKTSTRQAYFLPVIGLVDA------EKL 134
                   :|:.:||....|...:|...          :..|.|.|.|:.:...:|:      .||
plant   226 -------VEVFNVDVVPAEVYTTVATF----------VVWSMRLALFVSLYVWIDSITRPIYAKL 273

  Fly   135 KPGDLVGVNKD--SYLILETLPAEYDARVKAMEVDERPTEQYSDIGG---LDKQIQELIEAVVLP 194
            .|.||....|.  ..|..:.|.:...:|.|.:..:|:....:.|..|   :.:::||::..    
plant   274 IPCDLGTPTKKIRQPLKRQALGSLGKSRAKFISAEEKTGVTFDDFAGQEYIKRELQEIVRI---- 334

  Fly   195 MTHKEKFKNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRD 259
            :.:.|:|:|.||:.||||||:|||||||||||:|.|.:....|....|...|:||:|..|..|:|
plant   335 LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAGEAGLPFFAANGTDFVEMFVGVAASRVKD 399

  Fly   260 AFALAKEKAPAIIFIDELDAIGTKRFDSE-KAGDREVQRTMLELLNQLDGFS-STADIKVIAATN 322
            .||.::..||:||||||:||||:||...: ..|..|.::.:|::|.::|||. :|:.:.||.|||
plant   400 LFASSRSYAPSIIFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVTTSQVLVIGATN 464

  Fly   323 RVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSR-KMNVSNDVN---FEELSRSTDDFNGA 383
            |:|||||||||.||.|:.|....|:::.|..|:::|:| |...|.|..   .:|::.:|:||.||
plant   465 RLDILDPALLRKGRFDKIIRVGLPSKDGRLAILKVHARNKFFRSEDEKEELLQEVAENTEDFTGA 529

  Fly   384 QCKAVCVEAGMIALRRSANSVTHEDFMDAI--------------MEVQAKKKANLNY 426
            :.:.|..|||::..|:..:.:..|:.::|:              .||..:.|..|.|
plant   530 ELQNVLNEAGILTARKDLDYIGREELLEALKRQKGTFETGQEDSTEVPEELKLRLAY 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt5NP_524464.1 PRK03992 28..421 CDD:179699 134/423 (32%)
EMB3144NP_201263.2 HflB 147..748 CDD:440233 145/447 (32%)

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