DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rpt5 and FTSH11

DIOPT Version :10

Sequence 1:NP_524464.1 Gene:Rpt5 / 42805 FlyBaseID:FBgn0028684 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_568787.1 Gene:FTSH11 / 835398 AraportID:AT5G53170 Length:806 Species:Arabidopsis thaliana


Alignment Length:382 Identity:131/382 - (34%)
Similarity:191/382 - (50%) Gaps:37/382 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 SEVIRITHEIQAQNEKIKDNTEKIKVNKTLPYLV--------SNVIELLDVDPQ-EEEDDGSVTV 101
            :|.||......|.:|.:.|  |:.....:||.|:        .|:.|.. |:|. .|:....||:
plant   225 AEYIRALVITNAISEYLPD--EQTGKPSSLPALLQELKHRASGNMDESF-VNPGISEKQPLHVTM 286

  Fly   102 LDNQRKGKCAVIKTSTRQAYFLPVIGLV---DAEKLKP--GDLVGV------NKDSYLILETLPA 155
            ::.:...|....:.......|...:|||   .|..|:.  |.|.|:      :..||     .|.
plant   287 VNPKVSNKSRFAQELVSTILFTVAVGLVWIMGAAALQKYIGSLGGIGTSGVGSSSSY-----SPK 346

  Fly   156 EYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFKNLGIHPPKGVLLYGPPGT 220
            |.:..:    ..|:..:.:.|:.|.|...||| |.||..:.:..||..||...|||:||.|.|||
plant   347 ELNKEI----TPEKNVKTFKDVKGCDDAKQEL-EEVVEYLKNPSKFTRLGGKLPKGILLTGAPGT 406

  Fly   221 GKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRF 285
            ||||||:|.|.:....|...||.:..:||:|.||:.||..|..||:|||.||||||:||:|:.| 
plant   407 GKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTR- 470

  Fly   286 DSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEA 350
               |..:...::|:.:||.::|||.....|.|:||||..|||||||.|.||.||.|..|.|:...
plant   471 ---KQWEGHTKKTLHQLLVEMDGFEQNEGIIVMAATNLPDILDPALTRPGRFDRHIVVPSPDVRG 532

  Fly   351 RARIMQIHSRKMNVSNDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSANSVTHE 407
            |..|::::.:...:|.||:.:.::|.|..||||....:...|.:.|....|..::.|
plant   533 REEILELYLQGKPMSEDVDVKAIARGTPGFNGADLANLVNIAAIKAAVEGAEKLSSE 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt5NP_524464.1 PRK03992 28..421 CDD:179699 131/382 (34%)
FTSH11NP_568787.1 HflB <350..784 CDD:440233 100/249 (40%)

Return to query results.
Submit another query.